Plesiomonas shigelloides: SAMEA2665130_2602
Help
Entry
SAMEA2665130_2602 CDS
T04378
Name
(GenBank) bacteriophage N4 receptor, outer membrane subunit
KO
K11739
bacteriophage N4 adsorption protein A
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SAMEA2665130_2602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NfrA_C
TPR_19
TPR_16
TPR_14
TPR_15
TPR_2
TPR_CcmH_CycH
TPR_7
NatA_aux_su
TPR_9
TPR_17
ARM_TT21
TPR_1
TPR_Slam
TPR_20
TPR_11
Motif
Other DBs
NCBI-ProteinID:
SBT62052
LinkDB
All DBs
Position
1:2853074..2856070
Genome browser
AA seq
998 aa
AA seq
DB search
MSLPYARSTFAVMLYCALSGTLLAAKTPDAKGSELSAPNWGMSDYHYFISYPHLQKAMQA
MKNNDAHTAITQFEHVHREVPDNIAVTLYLAEAYRHFGRNEQAVQLLQHQLKRAPGNRAL
RQALDAIPIPLDKQITRTELLAQQARCDQEPTLRCRAAVGQAALHLSALDIAAAQLQDPN
FANSAVGHTLRTDLQQRAIYLKQWQYVEPEFNALRQQGKLSAAQAEQWFQILLLTRDYNR
LQQLQAQGVMDSPAQRLAYASELAQQGQHARLRHYLAQTPAPAFTNAQQEQGWLYLLSRY
SANPQQAVLNFPARFSANQQWIAQRRLEGLMQAKDYSAAQTFLANYPANQWLETRFSLSL
QQPGNTHSLALAQQLYRQQPSNSQLLDTLSYRLLQAGKSAAAIELLLQHYPFQGPYHGPY
NRTVRSQLATRLFELLERYPQYVTPAVLTRLSRPQPDVNLRLQQASWLASRHDCAAVTTL
LGNLSPAYPAASWDLLGNCYQKQLPGLALYAYQQSEQRQPSHYNQLAIAYQAAAVQNYPQ
AEHYWQQLPTNTLSDEDLLAAASTAQAAGNATALGHWLSLMQQRSMGGYAGYWWLTAQHT
PKSDPQSALSALDKAIHLKPLARFYAARAVIWQQLKQPQSALADLRQAHRMEPDNADYQA
ALGYALLDEGDYATARTLMRQALHTMPDDPGLIRQLAYVNQRLGDDPQTLRYAAQAIADI
SNAAAPYPLSAAQQQEQFALRRLYTDTTQRWTFSADSLLGLQSSALTSANSGSAQPGRSY
RSYGQLEANYRIGRNQLRSGDTLFAYSRIFAGSGENGNLLPVNDPMLGAGIRWKPFFSHT
FYLAAEQQIPLTAQSGKADVMLRASASLLNGGKFSDDWHPNGKGWFAQNLYLDAAYYVRQ
NQQSYTADYRASWHRKIAAGQTVEPYAHIQYNSFHDELIHSTGLTGVGVRWNIWSGQTRD
KAWPNKVSVGLEYQHTFSSHNPFNDDNNSVFMTLGGRW
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttccctatgcacgctccacattcgcggtcatgctgtactgcgccctgagtggc
acattactggctgcaaaaacaccggatgccaagggcagtgaactgtccgcgccgaattgg
ggcatgagtgattaccactacttcatctcctatccacacctgcaaaaagccatgcaggcg
atgaagaacaatgatgcacatacggcaattacccagtttgagcatgtgcaccgtgaagtg
ccggataatatagcggtaacactgtacttggccgaagcctatcgccatttcgggcgcaat
gaacaagccgtacagttactgcaacatcaattaaagcgcgcgccgggcaaccgcgcatta
cgccaagcgctcgatgccatcccgatcccccttgataagcagatcacccgcaccgaactg
ctggcgcagcaagcaaggtgtgaccaagagcccactctacgttgccgcgctgccgtagga
caagctgcattacacctgagtgccctcgatattgctgcagctcaactgcaagacccgaat
tttgccaacagcgccgtagggcacacgctacgcaccgacttacagcaacgcgctatttat
ctcaagcagtggcaatatgtagagcctgagttcaatgcattgcgccagcaaggcaaactt
agcgcggcgcaagcagagcaatggtttcagatcctactactgacccgtgactataaccgc
ctacagcagttgcaagcgcaaggcgtgatggatagcccagcacaacgcttagcctatgcc
agcgaattagcccaacaaggtcaacacgctcgcttacgccactatttagcacaaacgcct
gcacccgcctttacgaatgctcaacaagagcaaggctggctgtatctgctgtcacgctac
agtgccaatccgcagcaagcagtactgaacttcccggcccgttttagcgctaaccaacaa
tggattgcccagcgccgcttagaagggctaatgcaagccaaagactattcggccgcacaa
accttcttagccaactatccggccaaccaatggttagagactcggtttagcctcagtttg
cagcaaccgggaaatacccatagcctggcgttagcccagcagctgtatcggcagcagccg
agcaacagccagctgctcgatacgctgtcctaccgtttactgcaagcgggcaaatcagcg
gcggccattgagttactgctccagcactatccattccaaggtccatatcacggcccatat
aacagaaccgtgcgttcacagctggccacccgtctgtttgagttgttggagcgttatccg
cagtacgtcacaccggccgttttgacgcgattatcccgaccacagccggatgtgaatttg
cgtttgcagcaagcgagctggctggcatcacgccatgactgcgccgcagtcactacgctg
ttgggaaatctgtcgccggcataccctgcagccagttgggatttgctgggtaactgctac
caaaaacagctgccaggactcgcgctgtatgcgtatcagcaaagcgagcaacgtcaacca
tcccattacaatcagttggcaatcgcctaccaagccgccgcagtacaaaactatccgcag
gccgaacactactggcagcagttaccgaccaacacacttagcgatgaagatttactggct
gccgccagcaccgcgcaagccgctggcaatgctacggcgctcggccactggctatcgctg
atgcagcaacgcagtatgggcggttatgccggctactggtggttaactgcgcagcatacg
ccaaaatccgacccacagagcgcgcttagcgccctggataaggcaatacacctaaaaccg
ctcgcacgcttttacgcggcgcgcgccgtgatctggcaacagctcaaacaacctcaatcg
gcgctagccgatttgcgccaagcgcaccgtatggagccggataatgccgattaccaagcc
gcgctcggctatgcgttattggatgagggcgattatgcaaccgctcgaacgttgatgcgg
caagccttgcacaccatgccagacgatccgggcttaattcgccaactcgcttacgtaaac
cagcgtttaggtgatgacccacaaaccttgcgctatgccgcgcaggcgattgccgatatc
agcaacgcagccgcgccgtatccgctaagcgcagcacagcaacaagagcaatttgcccta
cgccgcctgtacactgacaccacccaacgttggacattcagtgccgacagtttgttaggc
ctgcaatccagcgccctgacgagcgcgaatagcggcagcgcccagcccggtcgaagttat
cgcagttatggtcaactggaagccaactaccgcattggccgcaatcaactgcgcagtggc
gatacgctgtttgcttactcgcgtatatttgctggcagcggcgaaaacggtaatctgcta
ccggtgaacgatcccatgctcggcgcggggatccgctggaagccgtttttcagtcacacc
ttctatctggcggcagagcaacagatccccctcaccgcgcaatcaggtaaggccgatgtc
atgctgcgcgccagtgcctcgttactcaacggcggtaaatttagtgatgattggcatccc
aacgggaaaggctggtttgcgcaaaacctgtatctggacgcggcctactatgtccgccaa
aatcagcaatcgtataccgccgattatcgcgccagttggcatcgaaaaattgccgcaggg
caaaccgttgagccgtatgcgcatatccaatacaacagcttccacgatgagctgatccac
agtaccggtttaaccggtgtgggtgtacgctggaatatctggagcggccagacccgcgac
aaagcttggccgaataaggtcagtgttggcctggagtatcaacatacgttcagtagccat
aatccattcaacgatgataataacagcgtatttatgaccctaggaggccgctggtga
DBGET
integrated database retrieval system
