Plesiomonas shigelloides: SAMEA2665130_2609
Help
Entry
SAMEA2665130_2609 CDS
T04378
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAMEA2665130_2609 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pshi01007
]
SAMEA2665130_2609 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshi03016
]
SAMEA2665130_2609 (lysS)
Enzymes [BR:
pshi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SAMEA2665130_2609 (lysS)
Amino acid related enzymes [BR:
pshi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SAMEA2665130_2609 (lysS)
Transfer RNA biogenesis [BR:
pshi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SAMEA2665130_2609 (lysS)
Prokaryotic type
Other AARSs
SAMEA2665130_2609 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
SBT62057
LinkDB
All DBs
Position
1:complement(2859474..2860988)
Genome browser
AA seq
504 aa
AA seq
DB search
MSEQQNLEQESTLDLNSEMATRRAKLAALREEGIAFPNDFRRDSISGDLHAAFDDKSKEE
LEALGKEVVVAGRIMTRRIMGKAAFVTLQDMGGQIQLYVSRDELPEGVYNEKFKKWDMGD
IIGARGKLFKTQTGELTIHCSDVRLLTKALRPLPDKFHGLSDMEMRYRQRYLDLITNPES
RRTFEIRSKVISGIRRYLEEQNFVEVETPMLHPIPGGTTALPFATHHNALDQEMFLRIAP
ELYLKRLVIGGMERVFEINRNFRNEGLSARHNPEFTMLEFYQAYADYNDLMDKTEDMLRT
LAMNILGSTTVHYGDHVYDFGKPFDRLTPAEATVKYTELTMDQLDTLEAARATCDAHGIK
YQPQWGVGRLQVEIFEELAEHCLIQPTFITKHPAETSPLARANDEDPTVTDRFELFIGAR
EIANAYSELNDPEDQDRRFRQQLVERDSGDAEAMHYDADYIMAMEYGLPPTAGEGIGIDR
LAMIFANAPSIRDVILFPAMRLQK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaacaaaatcttgagcaagaaagtacattagatctgaacagcgagatggca
acccgacgcgcgaagctggcagctctgcgtgaagaagggattgctttcccgaatgatttc
cgccgtgacagcatctccggtgacctgcatgctgccttcgacgataagtctaaggaagag
ctggaagcactgggtaaagaagtggttgttgcgggccgtatcatgactcgtcgtatcatg
ggtaaagctgcattcgttaccctgcaggatatgggtggtcagatccagctgtatgtatct
cgtgatgagctgccagagggcgtttacaacgagaagttcaagaaatgggacatgggcgac
atcatcggggcacgcggtaagctgtttaagactcagaccggcgagctgacaatccactgt
tcagacgtacgtctgctgaccaaggcactgcgcccgttaccagacaagttccacggcctg
tcagacatggaaatgcgctatcgtcagcgctatctggatctgatcaccaatccggaatct
cgtcgtactttcgaaatccgctctaaagtgatcagcggcatccgtcgttatctggaagag
cagaatttcgtggaagtggaaaccccgatgctgcacccaattccgggtggtaccactgca
ctgccatttgcgactcaccacaacgcactggatcaagaaatgttcctgcgtatcgcgcca
gagctgtacctgaagcgtctggtgatcggtggcatggagcgtgtgttcgagattaaccgt
aacttccgtaacgaaggtctgtctgctcgtcacaacccagaattcaccatgctggaattc
taccaggcgtatgctgactacaacgatctgatggacaagaccgaagacatgctgcgtaca
ctggccatgaacattctgggcagcaccaccgttcattacggtgaccacgtgtatgacttc
ggtaagccgttcgaccgtctgactccagcggaagcgactgtgaagtacactgagctgacc
atggatcaactggatacgctggaagctgcacgtgcgacttgtgatgcgcacggtatcaag
taccagccacagtggggcgtaggtcgtctgcaagttgagatcttcgaagagctggctgag
cattgcctgattcagccaaccttcatcaccaagcacccagcagaaacttctccgctggca
cgtgctaacgatgaagatccaaccgtaactgaccgcttcgagctgttcatcggtgcgcgt
gaaatcgcgaatgcttactccgagttgaacgacccagaagatcaggatcgtcgtttccgt
cagcagctggtagagcgtgactccggtgatgccgaagcaatgcactacgatgctgactac
atcatggcgatggaatacggcctgccaccaacagccggtgaaggtatcggtatcgaccgt
ctggcgatgatcttcgcgaacgcgccgagcatccgtgacgtgatcctgttccctgcgatg
cgtctgcaaaaataa
DBGET
integrated database retrieval system
