Plesiomonas shigelloides: SAMEA2665130_2611
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Entry
SAMEA2665130_2611 CDS
T04378
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03410
Base excision repair
pshi03430
Mismatch repair
pshi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA2665130_2611 (recJ)
03430 Mismatch repair
SAMEA2665130_2611 (recJ)
03440 Homologous recombination
SAMEA2665130_2611 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2611 (recJ)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SAMEA2665130_2611 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA2665130_2611 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAMEA2665130_2611 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
SBT62059
UniProt:
A0A1A9B0H1
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Position
1:complement(2862183..2863910)
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AA seq
575 aa
AA seq
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MNVEICRRPHVDDAHLSAVQPPLLRQIYASRGVQSMPELERSVKGMLDYRLLHGVDAATE
LLYQAMLAERQITIVGDFDADGATSTALSVLALRSLGANKVNFLVPNRFEDGYGLSPEVV
VQAEALGAELIMTVDNGISSHSGIEEAHRRGIQVLVTDHHLPGDTLPDADAIVNPNLEQC
AFPSKALAGVGVAFYLMLALRTRLREANWFSERQLAEPNLAELLDLVALGSVADVVPLDA
NNRILIWQGLSRIRAGRCRPGITALLEIANKDRTQLVASDLGFALGPRLNAAGRLDNMSL
GVALLLCDDMATARQLACDLDVLNQTRREIEQGMQQEALNLCQKLDQDHNLLPFGLALFH
PEWHQGVVGILASRIKERFHRPVIAFAPAGDGIIKGSGRSISGLHMRDALERIDSRHPGL
ILRFGGHAMAAGLSIHEQRFDDFQRCFADIVTEWLEPSALQGKIWTDGPLPAEMMSMHTA
ELLRAAGPWGQNFPEPLFDGEFNLLQQRKVGERHLKMLLEPVDGGPLLDGIAFNVDTQIW
PDPSVRKVTLAYRLDINEFRGNRSLQLLVEHLEPH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgagatttgccggcgtcctcatgtggatgacgcccacctgtctgccgtgcag
ccgccgctgctgcggcaaatttatgccagccgtggcgtgcaatcgatgccagagctggag
cgctcagtaaaagggatgctggattatcgtctgctgcacggtgtcgatgcggcgacggag
ttgctgtatcaggccatgctggccgagcgtcagatcacgattgtgggtgactttgatgcc
gatggggccaccagtaccgccttgagcgtcttggcactgcgcagccttggggcgaacaag
gtcaattttctggtgccgaaccgttttgaagatggttatggtttaagcccggaagtggtg
gtgcaagccgaagcgctgggcgcagagctgatcatgaccgtggataacggtatttcgtcg
catagtgggattgaagaagcgcatcggcgcggtattcaggtgctggttaccgatcaccac
ctgccgggcgatactctgccggatgccgatgccatcgtgaacccgaatctggagcaatgc
gcgtttccgtccaaagcgctggcgggggttggggtcgcattttatctgatgttggcgctg
cgtacgcgtctgcgtgaagccaattggttcagtgagcgccaattagccgagccgaatctg
gccgagctgctggatttggtggcgctggggagcgtggctgatgtggtgccgctggatgcc
aataaccgaattttaatttggcagggcttaagtcgcattcgcgcagggcgttgtcgtccg
gggatcactgcgctgctggaaatcgctaacaaagatcgtactcagttagtggcgtccgat
ttagggtttgcactgggcccgcgtttaaatgcagcaggacgtcttgacaacatgtcatta
ggtgttgcattactcttgtgtgacgatatggcaacagcccgtcagttagcctgtgatttg
gacgttttaaaccagactcggcgcgaaattgagcagggtatgcagcaggaagcattaaat
ctttgccagaaactagatcaagatcataatttgttacctttcggtcttgcactgtttcac
ccagagtggcatcaaggagtggtagggattctagcttcacgcataaaagagcgttttcat
cgtcccgtgattgcatttgcaccagcaggcgatgggattatcaaaggctcggggcgttcg
attagcggactgcacatgcgtgatgcgttagagcgaattgactcgcgtcatcccggattg
attttacgctttggtggtcatgcgatggcagcgggattgtccatccatgaacagcggttc
gacgattttcagcgctgtttcgccgacattgtcaccgagtggctcgagccttcggcactg
caaggcaaaatctggactgatggtccgttgccggcagagatgatgagcatgcataccgct
gaattgctacgcgccgccgggccgtggggacaaaacttccccgagccactgtttgacggg
gaatttaacctgttgcagcagcgtaaagtgggtgagcgacacctgaaaatgttgctagag
ccggtagacggtggcccattactggatgggatcgcatttaacgtcgatactcagatttgg
ccggatccgtcagtgcgaaaagtgaccctggcttatcggttggatatcaacgagtttcgg
ggtaaccgtagcctgcaattgctggtggagcatctggagccgcattaa
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