Plesiomonas shigelloides: SAMEA2665130_2623
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Entry
SAMEA2665130_2623 CDS
T04378
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA2665130_2623 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2623 (ung)
Enzymes [BR:
pshi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAMEA2665130_2623 (ung)
DNA repair and recombination proteins [BR:
pshi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA2665130_2623 (ung)
Prokaryotic type
SAMEA2665130_2623 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SBT62071
LinkDB
All DBs
Position
1:complement(2875573..2876244)
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AA seq
223 aa
AA seq
DB search
MPELNWSDVIGAEKQQPYFLDTMAYVAAERAAGKEIYPPEHDVFNAFRYTPFDQVKVVIL
GQDPYHGPNQAHGLCFSVLPGVPVPPSLVNMYKELAQDIAGFQIPQHGYLKSWADQGVLL
LNTVLTVERGQAHSHAKLGWETFTDRVIAAVNEHRQGVVFLLWGAHAQKKGRIIDRQRHH
VLTAPHPSPLSAHRGFLGCRHFSQTNQLLAQQNLPAIDWQPVL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgaactggagcgatgtgattggcgctgaaaagcagcaaccctattttctg
gacaccatggcctatgtagcggctgagcgcgcggcggggaaggagatttatccgccggag
cacgatgtattcaatgcctttcgctacaccccatttgatcaggtaaaagtggtgatctta
gggcaagacccgtatcacggccccaatcaggcgcatggtttgtgtttctcggtgctgccg
ggggtgccggtgccgccttcactggtcaatatgtacaaagagctggcgcaggatattgcg
ggctttcagatcccgcagcacggttacctgaaaagctgggccgatcagggcgtattgctg
ctcaacaccgtgctgaccgtcgagcgtggtcaagcgcattcgcacgccaagttgggctgg
gaaacctttaccgatcgtgtgattgccgccgtcaacgaacatcgccaaggggtggtcttc
ttgttgtggggcgcgcatgcccagaaaaagggccgcattattgaccgtcagcgtcaccat
gtgctcacggcgccgcatccttcgccactgtcggcacaccgtggtttcttgggttgtcgc
cacttttcacaaacgaatcagctgttagcacagcaaaatttaccggccattgactggcaa
ccggtgctctaa
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