Plesiomonas shigelloides: SAMEA2665130_2647
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Entry
SAMEA2665130_2647 CDS
T04378
Symbol
csiR
Name
(GenBank) Carbon starvation induced regulator
KO
K15735
GntR family transcriptional regulator, carbon starvation induced regulator
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_2647 (csiR)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA2665130_2647 (csiR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
FCD
Motif
Other DBs
NCBI-ProteinID:
SBT62094
LinkDB
All DBs
Position
1:2907150..2907836
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AA seq
228 aa
AA seq
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MSSPTITDQIFQVIKKDILLGILKPGQKLVVAELKERYGVGASPIREALIKLSWNKFVYI
EPQKGCWVAPVSIAELEDILDTRYTLERILLTKSIEQGDEEWELNVITSHHKLARIDDPA
NPDIDYDEWEERHNHFHLSLLSGCNSPKMLEFMENILEQMARYRHIWVNIRLDYAQRYHD
NGEHEKLMQAVLDRNIPLAIELTERHSQRALELMKESIHYLEKINALA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaagtccaacaattacggatcaaatttttcaggtcatcaaaaaagatattctctta
ggaatattaaagccaggtcaaaaactggttgtcgcggaattaaaagaacgttatggcgtc
ggcgcttcacccattcgcgaagccttaattaaattatcgtggaataaattcgtttatatt
gagccacaaaaaggctgctgggtagccccagtttcgattgccgaattggaagatattctg
gatactcgctacaccctcgaacgcatcctactgaccaagtccatcgaacaaggggatgag
gagtgggagctcaatgtaatcaccagtcaccacaaactggcacgcattgatgatccggcc
aacccagacatcgactatgatgagtgggaagagcgacacaaccactttcacctttctttg
ctctccggttgtaacagccccaagatgctggaatttatggagaatatattggagcagatg
gcgcgttatcgtcatatctgggtcaatattcgtctcgattacgctcagcgctatcacgac
aatggcgaacatgaaaaattaatgcaggccgtactggatcgcaatatccctctggcgatt
gaattaacggaacgacactcacagcgcgcactcgaattaatgaaagaatctattcattat
ttggaaaaaataaacgcactggcctaa
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