Plesiomonas shigelloides: SAMEA2665130_2696
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Entry
SAMEA2665130_2696 CDS
T04378
Name
(GenBank) Family of uncharacterised function (DUF490)
KO
K09800
translocation and assembly module TamB
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_2696
Transporters [BR:
pshi02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMEA2665130_2696
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
SBT62142
LinkDB
All DBs
Position
1:complement(2959944..2963855)
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AA seq
1303 aa
AA seq
DB search
MNPLKKLSIGFLITLLVLIAALAGLLGTESGLRLLVNGANRWVPGLHIGEFSGNWGRGLH
LQQVSFTMPGVDVAVDDALLQLQLGCLRRSEVCIRQVTVDKVRVAVDTALLPASEPTPSE
PLTRLSPPYPLLLRLLQLNDVEVTVDGTRISLGHFTSGAQWRGEALSLQPTEFNDLAVIL
AAPAADTASSAKEAKEGTVAEKTTATTDTAGTSANSTAAATAVTTKSSDAKAAAAKSAAT
PPSDAKAATSDDPAAMLQQLFASPLLPQLPAVVIPLDIEVAQIHGKNLRIDTGTPQTIDD
LLISASTQGNKVTLKQLQVSAPQGDVQLTGYARLQQKWPLELKLSSSVKLPDWPAQKLQA
TLSGALYDKLVLQAELSGALQANLHAQTELATAGLPLELTLRSPKLVWPLQGEPDYRVQG
VALALSGSARDYTASLNASYSGKDIPQGKVALKAAGDLEHVAISLLRLDTLQGSAQLKGS
LAWRKLLKWRADVNLSGINTAQQWPEWPARINGRLSTKGELQGDAWAVDLPILNLTGQAL
NKPLDVNAVLSGRSTGRWNISDLRMNVGGNRLQAKGVISDTWKLDAQINAPRLDGLLPGL
GGQVNGNVVLRGALMTPAVNLDLQANGLRWQDLTIGRLQAKADVKSQSQIQGTVAINLQN
LVQGDMTVSRAQLDASGSERQHQLRFTLQGEPVSAGLRLTGSFDRNSMNWRGTLSQTQAQ
TPLGPWTLQAPVALAYTHSRQQVSISPLCLTNPNAEVCIPQTMTAGASGQGRVQLRRLDL
AMFKELLGDETRVKGVVQGQAEFRWQANGGLPTVRANLSSSNLRVIQWLMGRRLPIDISQ
LGLNLRLENGRLQLSNDIQLKDNGSFNSQINISDLAGRRRLSGNVNINQLSLALLSPMLE
KTEKAEGMIGAQLQLGGVLDRPLLQGQLALQNPQLTGAWLPVDITGGNLTIRFAGARSNL
NGALQTPEGVLNLTGEADWQRPEQWSAMLNANANRLRIALPPMVRLDVNPDLTFRATPKA
MELTGSVRIPWARIEVDSLPESAVDSSSDLVLLNNQLQPINESNPAMAVNTDLMVRLGDD
VRLNAFGLKAQLKGSLHVLQNAQGPSVRGQVYLADGRFRSFGQDLVIRKGQLLFVGPPTQ
PMLNIEAIRNPESIQNDVVAGIRVTGMADNPLMTIFSEPSMSQAEALSYILRGEPLDDGN
SNDNGAMTSALIGIGLSQSSQLVGQIGQAFGISDLALDTQGVGDNSQVVISGYIMPGLQI
KYGVGIFDSLAELTLRYRLMPSLYLQAVSGLNQAVDLIYQFEF
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttaaagaagctgagtattggctttttgatcacactgctggtgctgattgcg
gcgctggcggggttgttgggcaccgagtctggcttacgtttgttggttaatggggccaac
cgttgggtgccgggcctgcatattggcgagttttccggtaactggggccgcggtctgcat
ctgcagcaggtgtcctttacgatgccgggtgtcgatgtggcggtggatgatgccttgctt
caactgcaattaggctgtttgcgccgtagtgaagtgtgtatccgtcaggtgacggtggat
aaagtgcgcgtcgcggtggacaccgccttgttgcccgccagtgagccgaccccttcggag
ccactgacccgcctaagccccccgtacccgttgttattgcgtctgctacaactgaatgat
gttgaggtgacggtggatggcactcgcatctctctgggccattttaccagtggcgcccag
tggcgcggtgaggcgttaagcctgcaacccactgagtttaacgatctggcggtgatcctc
gccgcgccagccgccgatacggcgagcagcgcgaaagaggcaaaagagggcacggttgca
gagaaaaccactgcgactacagatacagcgggcacgtcagctaattcgaccgcagcagcc
acagcggtaaccacgaagagctctgatgcgaaagccgccgccgccaagtcagctgccaca
ccgccaagcgatgcgaaagcggcgacgagcgacgatccggcggcgatgttgcaacagctg
tttgcttctccgttgttaccgcagttaccggcagtggtgatcccgctggatatcgaggtt
gcgcagatccacggtaaaaatttgcggattgataccggcacgccgcagaccatcgatgat
ctgctgatcagtgccagcacccaaggtaataaagttaccctcaagcaattgcaggtcagc
gccccgcaaggggacgtacaactgaccggatatgctcggttacagcaaaagtggcccttg
gagctgaagctgtcgagctcggtcaaattgccggactggccagcgcaaaagctgcaagcg
accttgagcggtgcgctgtatgacaagttggtgttgcaggcggagttaagtggcgcgctg
caagctaacttgcatgcgcagaccgagctggcgaccgccggcttgccgctagagctgacc
ttacgtagccctaaactggtgtggccgctgcaaggtgagcccgattatcgggtgcaaggg
gtggcattggcgctttctggcagtgcgcgtgattacaccgccagcctcaatgccagctac
agcggtaaagacattccacaaggcaaagtggcacttaaagcggccggtgatttggagcac
gtggctatctcgctgctgcgccttgataccttgcaaggctcggcccagctcaaaggctcc
ttggcttggcgtaagctgctcaaatggcgcgcggatgtgaatttatccggcatcaacact
gcgcagcagtggccggagtggcctgcacgcatcaatggtcgtttaagcaccaaaggggag
ttgcaaggcgatgcatgggcggtggatttaccgattttaaatctgaccggacaggcactg
aataagccgctggacgtcaacgccgtcttaagtggccgcagcactggccggtggaatatc
tctgatttgcgtatgaatgtcggcggcaaccgtctgcaggccaaaggtgtgatcagcgat
acgtggaagctggatgcgcagattaacgcgccgcgcttagatggcctgttaccgggcctc
ggtggacaggttaacggtaacgtggtgctgcgcggagccttgatgacaccggcggtgaat
ctggatctgcaagccaatggattacgttggcaagacctgaccattggccgtttgcaagct
aaggctgatgtgaagagccagtcgcaaattcagggcaccgtggccatcaacttgcagaat
ctggtgcaaggcgacatgaccgttagccgcgctcagctggatgccagcggtagcgagcgg
caacatcagctgcgctttaccctgcaaggcgaaccggtgtcggccggcttgcggttaacc
ggcagcttcgatcgcaatagcatgaactggcgcggtaccttgagtcagactcaggcgcag
accccgttggggccatggacactgcaagcgccggtggcgctggcgtacacccatagccgt
cagcaagtgagcatcagtccgttgtgtctgactaacccgaatgccgaagtgtgcatcccg
cagaccatgaccgcgggtgctagcggccaagggcgcgtgcagttgcgccgtttggatctg
gcgatgttcaaagagctactcggcgatgagacccgcgttaaaggtgtggtgcagggccaa
gcggagttccgttggcaggccaatggtggcttaccaacggtgcgagcgaacttgagtagc
agcaatctgcgggtgatccagtggttgatgggccgccgtttaccgattgatatcagtcag
ttggggcttaatctgcgcctagaaaatggccgtttgcaactgagcaatgacatacaactt
aaagacaacggcagcttcaatagccaaatcaacatcagtgacttggcgggacgtcgtcgc
ctgagcggtaatgtgaacattaatcagctgtcgctggcgttgttgtcgccgatgctagag
aaaaccgaaaaagcggaagggatgatcggtgcccagctgcaattgggcggggtgctggat
agaccgttgctgcaaggtcagttggcgctgcaaaatccacagctgactggtgcgtggctg
ccggtggatattaccggcggtaacctgaccattcgctttgctggtgcgcgctcgaacttg
aacggtgcgctgcaaacgccggaaggggtgttgaacctcaccggtgaggcggattggcag
cgtccagagcagtggagcgcgatgctgaacgcgaacgccaatcgtctgcggatcgcattg
ccaccgatggtgcggctggacgttaatcccgatctcaccttccgagcgacgccaaaagcg
atggagctgactggctcggtgcgcatcccgtgggcgcgtatcgaagttgatagcctgccg
gaaagtgcggtggatagctcgtcagatttggtgttgctgaataaccagctgcagcccatc
aacgaaagcaatcctgcgatggcggtgaataccgacttgatggtgcggctgggcgatgat
gtgcgcctgaatgcctttggtctcaaggcgcagctcaaaggcagcttgcacgtactgcaa
aatgcccaagggccatcagtgcgtgggcaggtgtatctggccgatggccgcttccgctcc
ttcgggcaggatttggtgatccgtaaagggcagttgctgtttgttggcccgccaacgcag
ccgatgctgaacatcgaagcgatccgtaacccagaatcgatccaaaacgatgtagtggcc
gggatccgagtcaccggcatggcggataacccgctgatgactatcttctcggagccgtcg
atgtcacaggccgaagcgctgtcttacattctgcgcggcgagccattggatgacggtaac
tccaatgataacggcgcgatgacctctgccttgattgggattggcttgtcacaaagcagt
cagctagtagggcaaattggtcaggcgtttgggatcagcgatctggcactggatacgcaa
ggggtgggagataactcccaagtggtgatcagtggctatatcatgccgggtctgcagatt
aagtacggggtcgggatctttgactcgctggcagagctgaccttgcgttatcgcttgatg
ccaagtctgtatctgcaagccgtgtcgggattgaatcaggcggtggatttgatctaccag
tttgagttctaa
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