Plesiomonas shigelloides: SAMEA2665130_2749
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Entry
SAMEA2665130_2749 CDS
T04378
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SAMEA2665130_2749 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshi03019
]
SAMEA2665130_2749 (orn)
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_2749 (orn)
Messenger RNA biogenesis [BR:
pshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA2665130_2749 (orn)
Ribosome biogenesis [BR:
pshi03009
]
Eukaryotic type
Pre-60S particles
RNases
SAMEA2665130_2749 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SBT62190
LinkDB
All DBs
Position
1:complement(3018026..3018571)
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AA seq
181 aa
AA seq
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MAADKENLIWIDMEMTGLNPDTDKVLEIATIVTDKHLNILAEGPVLAIHQPDDVLAGMDD
WCTRTHTESGLVARVRASTCSEAQAEAQTLDFLAQWVPAGASPICGNSIGQDRRFLYRHM
PQLEQYFHYRYLDVSTLKELARRWKPEILAGFSKQGTHLALDDIRESIAELRYYRENFIR
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgataaagaaaatttaatctggattgatatggaaatgaccggactcaatccg
gataccgataaagtgctggagatcgccaccattgtgaccgacaagcacttgaacatttta
gccgaagggccggtacttgccattcatcagcctgacgatgttctggcggggatggatgac
tggtgcacccgcacccataccgaaagtggtctggtggcccgcgtgcgcgccagcacctgc
agcgaagcacaagccgaagcgcagacgctggattttctggcgcagtgggtgcctgcgggc
gcgtcaccgatttgtggcaacagtatcggtcaagatcgccgcttcttgtatcgccacatg
ccgcagttggagcagtacttccattaccgctatctggatgtcagtaccttaaaagagctg
gcgcgtcgctggaagcctgaaattctggctggctttagcaagcaaggcacccatttggcg
ttggatgacatccgtgaatctatcgcggagctgcgctattaccgcgagaatttcatccgt
ttataa
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integrated database retrieval system
