Plesiomonas shigelloides: SAMEA2665130_2754
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Entry
SAMEA2665130_2754 CDS
T04378
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00020
Citrate cycle (TCA cycle)
pshi00190
Oxidative phosphorylation
pshi00620
Pyruvate metabolism
pshi00650
Butanoate metabolism
pshi00720
Other carbon fixation pathways
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01200
Carbon metabolism
pshi02020
Two-component system
Module
pshi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pshi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pshi_M00150
Fumarate reductase, prokaryotes
pshi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMEA2665130_2754 (frdA)
00620 Pyruvate metabolism
SAMEA2665130_2754 (frdA)
00650 Butanoate metabolism
SAMEA2665130_2754 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SAMEA2665130_2754 (frdA)
00720 Other carbon fixation pathways
SAMEA2665130_2754 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA2665130_2754 (frdA)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAMEA2665130_2754 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
DAO
Lycopene_cycl
GIDA
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
SBT62195
LinkDB
All DBs
Position
1:3026023..3027816
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AA seq
597 aa
AA seq
DB search
MQTFTADIAIIGAGGAGLRAAIAAAEANPNLKIALVSKVYPMRSHTVAAEGGSAAVALDH
DSYDNHFNDTVSGGDWLCEQDVVEYFVKHSPIEMTQLEQWGCPWSRRPDGSVNVRRFGGM
KIERTWFAADKSGFHMLHTLFQTSIQYPQIQRFDEHFVLDLLVDNGEARGLVAMNMMEGT
LVQIRANSVILATGGAGRVYRYNTNGGIVTGDGMAMAYRHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPVGQPKNKYMELGPRDKVSQAFWHEWR
AGRTISTPLGDAVHLDLRHLGAKYLNERLPFICELAKAYVGVDPVKEPIPVRPAVHYTMG
GIETDNQCETRIKGLFAVGECSSVGLHGANRLGSNSLAEIVVFGRLAGENAVARAAEMGE
ANDAALNAQAKDIENRLHSVLNQEGNESWSKIRDEMGMSMEEGCGIYRTEDLMQATVDKL
AELKERIKKVSIKDRSSVFNTDLLYAIEVGYSLDVADAMANSALARKESRGAHQRLDEGY
TERDDVNFLKHTLAFRSEDGGAPRLEYSDVCITKSQPAKRVYGAEAEDQEKQKKEQA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacctttaccgcagacatcgctatcattggtgcgggtggtgcgggcttgcgtgcc
gcaattgccgcagccgaagccaaccctaatctgaagatcgcgttggtatccaaggtatac
cctatgcgcagtcacaccgttgcagccgaaggtggctccgcagcggtagcactggatcat
gacagctacgacaaccacttcaacgataccgtatccggtggtgattggctgtgtgaacaa
gacgtagtcgaatacttcgttaaacactcaccgattgagatgacccaactggagcagtgg
ggttgtccgtggagccgtcgtccggatggttctgtaaacgtacgtcgcttcggcggtatg
aaaattgagcgtacttggtttgctgcggataagtccggcttccatatgctgcataccctg
ttccagacgtctatccaatatccacaaatccagcgctttgacgagcacttcgtactggac
ctgctggtagacaacggcgaagcccgtggtctggtcgcaatgaacatgatggaaggtaca
ctggtacagatccgcgccaacagcgtgatcctggctaccggtggtgccggccgtgtttac
cgttacaacaccaacggcggtatcgtaactggtgatggtatggcgatggcttaccgtcat
ggcgtacctctgcgtgacatggaattcgttcagtaccacccaaccggtctgccgggctca
ggtatcctgatgaccgaaggctgccgtggtgaaggtggtattctggtgaacaaagacggc
taccgttacctgcaagactacggtctgggaccagaaaccccagtcggtcagccgaagaac
aagtacatggaactgggtccacgtgacaaagtttctcaggcgttctggcacgagtggcgc
gcaggccgcaccatctctacccctctgggcgatgcggtacatctggacctgcgtcacctg
ggtgctaagtacctcaacgagcgtctgccgttcatctgtgaactggcgaaagcttacgtg
ggcgtggatccggttaaagagccaatcccagtacgtccagccgtacactacaccatgggt
ggtatcgaaaccgataaccagtgcgaaacccgcatcaagggtctgttcgcagtgggtgag
tgttcttctgtgggtctgcacggtgcgaaccgtctgggttctaactcactggctgaaatc
gtggtattcggtcgtctggccggtgaaaatgccgtggcacgcgccgctgaaatgggcgaa
gccaacgatgcagctctgaatgcacaagccaaagacatcgaaaaccgtctgcacagcgtt
ctgaatcaggaaggtaatgagtcctggtcgaagatccgtgacgagatgggcatgtctatg
gaagaaggttgcggtatctaccgtaccgaagatctgatgcaagccaccgttgataagctg
gctgagctgaaagaacgtatcaagaaagtgtctatcaaagaccgctccagtgtgttcaac
actgatctgctgtacgccatcgaagtgggttacagcctggacgtggccgatgccatggcg
aactctgcgctggcgcgtaaagagtctcgtggtgcgcaccagcgtctggacgaaggctat
accgagcgtgatgacgtgaacttcctgaagcatactctggccttccgtagcgaagacggc
ggcgcgccgcgtctggaatacagcgatgtatgcatcaccaagtcccagcctgccaagcgt
gtatacggcgctgaagcagaagaccaagaaaagcagaagaaggagcaggcataa
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