Plesiomonas shigelloides: SAMEA2665130_2766
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Entry
SAMEA2665130_2766 CDS
T04378
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA2665130_2766 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshi03019
]
SAMEA2665130_2766 (groL)
03110 Chaperones and folding catalysts [BR:
pshi03110
]
SAMEA2665130_2766 (groL)
03029 Mitochondrial biogenesis [BR:
pshi03029
]
SAMEA2665130_2766 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshi04147
]
SAMEA2665130_2766 (groL)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMEA2665130_2766 (groL)
Messenger RNA biogenesis [BR:
pshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMEA2665130_2766 (groL)
Chaperones and folding catalysts [BR:
pshi03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMEA2665130_2766 (groL)
Mitochondrial biogenesis [BR:
pshi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMEA2665130_2766 (groL)
Exosome [BR:
pshi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMEA2665130_2766 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SAMEA2665130_2766 (groL)
Exosomal proteins of breast cancer cells
SAMEA2665130_2766 (groL)
Exosomal proteins of colorectal cancer cells
SAMEA2665130_2766 (groL)
Exosomal proteins of bladder cancer cells
SAMEA2665130_2766 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
SBT62207
UniProt:
A0A1A9B155
LinkDB
All DBs
Position
1:complement(3035328..3036974)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCADTKAIAQVGTISANSDETVGTLIAEAMERVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSAELDNPFILLVDKKISNIRELLPVLEAV
AKSGKPLMIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTNGTV
ISEEIGMELEKATLEDLGQAKRVVITKDNTTIIDGVGDEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKLVGLTGQNEEQNVGIRVALRAMEAPLRQIVINAGEEGSVVANNVKAGEGNYGYNA
ATEEYGDMLEMGILDPTKVTRSALQYAASVAGLMITTECMVTDMPKEEKADMGAGMGGMG
GMGGMGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtgaagtttggcaatgatgcacgcgtaaaaatgctgcgtggtgta
aacgtactggctgacgcggtaaaagtaacactgggcccgaaaggccgtaacgtggtactg
gataaatctttcggtgcgccaactatcactaaagacggtgtatctgtagcacgtgaaatc
gaactggaagacaagttcgagaacatgggggcgcagatggtgaaggaagttgcctctaaa
gcgaacgacgctgccggtgacggtactaccactgccaccgtactggcgcaggctatcgtg
aacgaaggtctgaaagcggttgctgcgggtatgaacccaatggatctgaagcgcggtatc
gacaaagcggtgattgctgcggttgaagagctgaaagcgctgtctgttccttgtgctgat
accaaagctatcgctcaggtaggtaccatctctgctaactctgatgagactgtgggcacc
ctgattgctgaagctatggagcgcgtaggtaaagaaggcgtgatcactgtagaagacggc
accggcctgcaagacgagctggatgtggtagaaggtatgcagttcgaccgcggttacctg
tctccatacttcatcaacaagccagaaactggctctgctgagctggataacccattcatc
ctgctggtagataagaagatctccaacatccgtgaactgctgccagttctggaagcggtg
gccaagtctggtaagccactgatgatcatcgcggaagatgtcgaaggtgaagcgctggca
acgctggtagtgaacaccatgcgcggtatcgtgaaagtggctgctgttaaagcgccaggt
ttcggtgaccgtcgtaaagcaatgctgcaagatatcgcgaccctgaccaacggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcgactctggaagacctgggccaagct
aagcgcgttgttatcaccaaagacaacaccaccatcatcgatggcgtgggtgatgaagcc
gctatccaaggccgcgtagcgcagattcgtcagcaaatcgaagaagccacttctgactac
gaccgtgaaaaactgcaagagcgcgtagcgaaactggctggcggtgttgctgtgatcaaa
gtcggtgctgctaccgaagtggaaatgaaagagaagaaagcgcgcgtagaagatgccctg
cacgcaacccgtgctgcggtagaagaaggcgtggttgctggtggcggtgttgctctggtg
cgtgttgctagcaagctggttggcctgactggtcaaaacgaagagcaaaacgtgggtatc
cgcgtagctctgcgtgcgatggaagcgcctctgcgtcagatcgtgattaacgcgggtgaa
gaaggctctgtggttgcgaacaacgtgaaagcgggcgaaggtaactacggttacaacgcg
gcgaccgaagagtacggcgacatgctggaaatgggtatcctggatccaaccaaggtaacc
cgttctgcactgcagtacgcagcttccgtagccggtctgatgatcactaccgagtgcatg
gttactgacatgccgaaggaagagaaagctgacatgggcgccggtatgggcggcatgggc
ggtatgggcggcatgggcatgatgtaa
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