Plesiomonas shigelloides: SAMEA2665130_2849
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Entry
SAMEA2665130_2849 CDS
T04378
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA2665130_2849 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2849 (priA)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA2665130_2849 (priA)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA2665130_2849 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
AAA_22
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SBT62272
LinkDB
All DBs
Position
1:3136509..3138755
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AA seq
748 aa
AA seq
DB search
MSDTLVRVALPVPLPRLFDYCLPHSWQAQARPGVRVRVPFGKRELIGVIDSLPDHTEIPL
DQCKPVLAVLDQEPLWPTPMWDLLHWAASYYQHPLGDVFAQAMPVLLRQGHSAEPAAQTV
WQLTDSGRLCTPEQLKRSPKQWQIIQALRHGALEKSALQAEGCSDSAFNALRQKGLIDQQ
LRQPELTDWRRSYPAAHASSTGVLSHNGAEPPLRLNTEQATAVAAINAQDGFSAWLLDGI
TGSGKTEVYLNVIERALSQGKQALVLVPEIGLTPQTISRFRQRFAVPVDVLHSALNDSER
LAVWQRARCGESAIVIGTRSALFTPLARPGVLVIDEEHDASYKQQDGWRYHARDLAVMRA
HAEQIPIILGSATPSLESLLNARQGKYHLLTLASRAGNARPAQQHVIDMRGQPVQAGLSA
ALLARMRQHLQKGNQVMLFLNRRGFSPALLCHECGWVAHCPRCERPYTFHQATRDLRCHQ
CDNQHPVPHQCPQCGSTQLVPVGVGTEQVEHTLEQLLPEFAISRIDRDSTRRKGALEQHL
DDIRDGRSQILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRAAERFAQLYTQVAGRA
GRAGKAGEVLLQTHQPEHPLLQTLLQSGYGAFAQQALLERQAAWLPPYTYHVLIRAEDHQ
SDPPAQLLTQLRTILEASPLLDSDFWLLGPAPALQSKRAGRFRWQLLLQHPSRRKLQQIL
AIARPAFEALPLARKVRWNIDVDPIEMI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatactctagttcgcgtggcccttcctgtgccactgccccgcctgtttgattac
tgtttgccacactcttggcaggcgcaagctcgccctggtgtacgggttcgggtgccgttt
ggcaaacgtgagctgattggtgttatcgatagtctgccggatcacaccgagatcccgctc
gatcaatgcaaacctgtgctggccgtgctggatcaagagccgctgtggccaaccccgatg
tgggatctgctgcactgggccgccagctactatcaacatccgctgggagatgtgtttgcc
caagcaatgcccgttctgctgcgccaagggcacagcgccgagcccgccgcgcaaaccgtg
tggcaactgaccgacagcggtcgcctgtgcacacctgagcagctcaaacgctcgcccaag
caatggcagatcattcaggcgctgcgccacggtgcgttggaaaaaagcgccctgcaggcc
gaaggctgtagcgacagcgcctttaatgccctgcggcaaaaaggcttgattgaccagcaa
ctgcgccaaccagagctgaccgactggcggcgtagctatcccgcagcgcacgccagtagc
accggcgtgctgagccacaacggcgccgagccgccgctgcgcctcaacaccgagcaagcc
acggcggttgccgccatcaatgcacaagacggtttttccgcgtggctgctcgatggcatc
accggctcggggaaaaccgaagtctatctgaatgtgattgagcgggcgctcagccaaggc
aagcaagcgctggtattggtgcccgaaattggcctgacaccgcaaaccatcagccgtttt
cgccagcgctttgcggtaccagtagatgtgctgcattccgcgctcaatgacagcgaacgc
ttggccgtctggcagcgggcgcgctgcggtgaaagtgccattgtcatcggtacccgctcg
gcgctgttcacccccttagcgcgccctggggtgctggtgattgacgaagagcacgacgcg
tcttacaagcagcaagatggctggcgctaccacgcccgcgatctggcggtgatgcgcgcc
catgccgagcaaattccgattatcttaggctcggccaccccatcgctggaaagtctgctt
aatgcacgacaagggaaataccacctcttaacgctggccagccgcgccggtaatgcccgc
ccggcacagcagcatgtgatagatatgcgcggtcagccggtacaagcgggactgtccgct
gccttactggcgcgcatgcgtcagcacttgcagaagggcaatcaggtgatgctgtttctc
aaccggcgtggtttctcaccggcgctgctgtgccatgagtgcggttgggttgcccactgt
ccgcgctgtgagcgtccgtatactttccatcaggccacccgcgacctgcgctgtcaccag
tgtgataaccagcatccggtgccgcaccaatgtccgcagtgtggctccacacagctggtg
ccggtcggcgttggcaccgagcaggtcgaacacaccctagagcaattgctgccggaattt
gccatcagccggattgatcgcgacagcacccgccgtaaaggcgcgctggagcaacatctg
gacgatatccgcgacgggcgcagccaaatcttgatcggcacccagatgctggccaaaggc
caccactttcccgatgtcacgctggttgccttgctggatgtggatggcgcgctgttctcc
gccgattttcgcgccgctgagcgctttgctcagctgtatacgcaggtagcgggtcgtgcc
ggtcgtgccggtaaagccggtgaagtgttactgcaaacccaccagcctgagcacccattg
ctgcaaaccttgctacaaagcggctatggcgccttcgcccagcaagctctgctcgagcgc
caagcggcgtggttaccaccttatacttaccatgtattgatccgcgccgaagatcaccaa
agcgatccgcccgcccagctgctgacgcaactgcgtaccatcctcgaagccagccccttg
ctggacagcgatttttggctactggggcctgctccagcactgcaaagcaaacgcgcggga
cgctttcgttggcaactgctgttacagcacccatcgcggcgtaaattgcagcagatcttg
gcgatcgccagacccgcctttgaagcattaccgctagcgcgcaaagtgcgctggaacatc
gatgtcgatccgattgagatgatctaa
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integrated database retrieval system
