Plesiomonas shigelloides: SAMEA2665130_2886
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Entry
SAMEA2665130_2886 CDS
T04378
Symbol
rfaL
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00540
Lipopolysaccharide biosynthesis
pshi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA2665130_2886 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
SAMEA2665130_2886 (rfaL)
Enzymes [BR:
pshi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
SAMEA2665130_2886 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
Core region
SAMEA2665130_2886 (rfaL)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Wzy_C
GP11
DUF6541
Motif
Other DBs
NCBI-ProteinID:
SBT62309
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All DBs
Position
1:3174092..3175315
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AA seq
407 aa
AA seq
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MNKKELLPNTTILFIFASISLAMFNIAYSRDTFYIAGYLSIIYFLTNINKQTIISNALPL
SILLLGLSKIIWSMYYEPSSSNFSNVYNSYFDVGKRLVIASFLVSFAINTDSVHKEKLTN
IIRLVMPFVALAIAVYSAYQFHILGLARTELSTNRATATAYMLTPVLLLSLFCCIKEKPS
LNNIIFLALVFGACLYSILLTQTRAAILAFTFIALLMLMFKLKNEIRKTVLLSLATIISV
ATIINYDGIVKPRATQAFTEIINFDQTKDNGSLGNRFTMWIAGAKSTYSHPLGQSAEQRY
QSIDRQIKENIINPMIYRYVDVHLHNETIDTISLQGITGFSALILFYLFTIKFSLKEKNY
LLLSISLTIILYGLSDVLFFSQEVAVTYMSALALAIMIGNQHENSSL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaactactgcctaatacgacaatattatttattttcgcgtctatttcc
ttagcgatgtttaacatagcatattctcgtgatactttttatattgcaggatatctatct
atcatttactttttaacaaatatcaacaagcagactattatcagtaatgcattacctcta
tcgattttactccttggactttcaaaaataatctggtcaatgtactacgaaccaagtagt
tccaacttcagtaatgtttacaactcttattttgatgtaggaaaaagacttgtcatagca
tcattccttgtctcatttgcaatcaatactgacagtgtacataaggaaaagctaacgaac
atcattcggctagttatgccatttgtcgctttagctatcgctgtatactcagcctatcag
tttcatattcttggcttagcacgcactgaattatcaacaaacagagcaacagcaaccgcc
tatatgttgacaccagttctattacttagcctattttgctgtataaaagaaaaaccctca
ctgaataacattatatttttagccttagtattcggagcttgcctctactcaatcctatta
acacaaacacgcgctgcaatattagcctttacatttatcgcattactcatgctcatgttt
aagctaaaaaatgaaataagaaaaaccgttttgctatcgcttgcaaccattatttcagta
gctaccattataaactatgacggtatagttaagccacgagcaacacaagcgttcacagag
attataaacttcgaccaaacaaaagataatggttcccttggcaaccgttttactatgtgg
atcgcaggtgctaaatcaacctactctcatcccctcgggcaatcagcggagcaacgctat
caatcgatagatagacaaattaaggaaaatatcatcaatcccatgatttatcgatacgta
gatgttcacctgcacaatgagacgattgacacaatatctctacaaggaattaccggattt
tcagcattaatattattctatctatttacaataaaattcagtttgaaagaaaaaaactat
ttattgctgtcaatcagtttaactatcattctttatggtcttagcgatgttctattcttc
agccaagaagtcgcggttacttatatgtcagcactagcacttgcgatcatgatcggaaat
caacatgaaaatagctcactttga
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