Plesiomonas shigelloides: SAMEA2665130_2891
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Entry
SAMEA2665130_2891 CDS
T04378
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein rfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00540
Lipopolysaccharide biosynthesis
pshi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA2665130_2891 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
SAMEA2665130_2891 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
pshi01005
]
Core region
SAMEA2665130_2891 (rfaG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Glyco_trans_1_2
DUF2325
Motif
Other DBs
NCBI-ProteinID:
SBT62314
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Position
1:3179902..3181032
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AA seq
376 aa
AA seq
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MDNFRLALVRQKYRPDGGAERFVARALTALSGQNIELNVITRQWNDAVNPNWHIHICNPP
KWGRISRERGFAHAARALWTQQGFDLVQSHERIPGCGLYRAGDGVHRRYLEQRCRTLPGW
RGKLLYADPYHRYVLQAEREMFTAPELQAVICNAEMVKREIMADFGVADEKIHVIYNGID
STRFVPATELQRQQAIAHLGLPSEPSYLIYVGSGFERKGLATAIAALQGSQRHLLVIGKD
KAEQRYRALARSLGLEHQVHFFGMQRDVLAFYHAADALLLPTRYDPFPNVILEAMACGLP
VITSTHCGGAEFIQNGQQGFVTDALDTAAIQEAISQLPPRALGSNMGEAARQQILDCSPQ
KMSEKLINLYRELLHK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggataatttccgccttgccctcgtccggcaaaaataccgtcctgatggcggcgctgaa
cgctttgtggcacgcgccctgaccgcgttatcaggacaaaacatcgaactgaatgtgatc
acccgccagtggaatgatgccgtcaatcctaactggcacattcacatctgtaatcccccg
aaatggggccggattagccgcgaacgtggatttgcccatgctgcgcgggcgctgtggaca
cagcaaggctttgatttggtgcaaagccatgagcgcattcccggttgtggcttataccga
gcaggtgatggcgtccatcgtcgctacttagaacagcgttgtcgtaccctgcccggctgg
cgcggcaaactgctgtacgccgacccctatcatcgctatgtactgcaagccgagcgtgag
atgttcactgcaccagagctgcaagcggtgatttgtaatgccgaaatggtcaaacgagaa
attatggccgattttggggtggcggatgaaaaaatccacgtgatttacaacggcattgat
agcacgcgcttcgtgcccgccaccgagctacaacgccaacaagccatagcccacttaggg
ctgccaagtgagcctagctatctgatttacgtcggctccggctttgagcgcaaagggctc
gctaccgctatcgccgcgctacaaggcagtcaacggcatctgttggtgattggtaaggac
aaagccgaacaacgttaccgcgccctcgcgcgcagcttgggccttgagcatcaagttcac
tttttcggtatgcagcgcgatgtcttagctttttaccacgcagccgatgcattgttactg
ccaacacgctatgacccgttccctaacgtgatcctcgaggcgatggcctgcggtttaccg
gtcatcaccagcacgcattgtggtggcgccgaatttattcaaaacggccaacagggtttt
gtgaccgatgcgttggataccgccgcgattcaagaagccatcagccaattaccgccgcga
gcgctcggctcaaacatgggtgaggccgcacgccagcaaatactggattgttcaccacaa
aagatgtccgaaaagctgatcaacttgtaccgggagctgctacataaatga
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