Plesiomonas shigelloides: SAMEA2665130_2968
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Entry
SAMEA2665130_2968 CDS
T04378
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00300
Lysine biosynthesis
pshi00470
D-Amino acid metabolism
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01230
Biosynthesis of amino acids
Module
pshi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMEA2665130_2968 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA2665130_2968 (lysA)
Enzymes [BR:
pshi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAMEA2665130_2968 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
SBT62390
UniProt:
A0A8I1W713
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All DBs
Position
1:complement(3264521..3265774)
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AA seq
417 aa
AA seq
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MDHFNYQDDQQLYAEGVALPALAAQFGTPLYVYSRATLERHWHAFDTAVAGHPHLICYAV
KANSTLALLNLLARLGSGFDIVSRGELERVLAAGGAPDKVVFSGVAKSRSDIERALEVGI
RCFNVESEAELQRLNQIAGERGCRAPVSLRVNPDVDAKTHPYISTGLKENKFGISHQDAR
RIYRIARDLPHLQVVGIDCHIGSQLTELAPFLDALDRLLLLIDALAEDGIHLRHVDVGGG
LGVRYDSETPPQPAEYAAALLAKLAGRPELELVFEPGRAIVANAGVMLTRVEYLKASADR
HFAIVDAGMNDLLRPALYQAWMQILPADRALVRPSACYDVVGPVCETSDFLGKQRELAIA
QGDLLVVRSAGAYGFSMSSNYNSRPRAAEVLVDGTEFHLIRERETLSDLWRGEHLLP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttaactatcaggacgatcagcagttatatgctgaaggcgtggcactgcct
gcattggccgcgcagtttggtaccccgctgtatgtctattcccgcgcgacgctggagcgt
cactggcacgcctttgatactgcagtggccggtcatccacacctgatttgctatgcggtc
aaagccaactccaccttggcactgctcaatctgctggcccgcttgggttcggggtttgat
attgtgtctcgtggcgagctggagcgcgtattagccgccggcggtgcgccagacaaggtg
gtgttttctggggtggcgaaaagccgaagcgatatcgagcgcgccttggaggtcgggatc
cgctgctttaacgtggagtcggaagctgaattacagcgcctcaatcagattgccggtgaa
cgcggttgccgcgcgccagtctcgttacgggtaaaccccgatgtggatgccaagacccat
ccgtacatctccaccggtctgaaagagaacaaatttggcatcagccatcaagacgcgcgg
cgcatttaccgtatcgcgcgcgatctgccgcatctgcaggtggtgggcattgattgccat
atcggctcgcaattgactgaattagcgccgtttttggacgcattagaccgtttactgctg
ctgattgacgcattagcggaagatggcatccatttacgccatgtggatgtcggcggcggc
cttggggtgcgctatgatagcgaaaccccaccgcaaccggcggagtatgccgcggcgcta
ctggccaaattggccggacgacctgagctggagctggtgtttgagcccggtcgtgcgatt
gtcgccaatgctggggtgatgctgacacgggtggaatacctgaaagcctccgccgatcgt
cactttgcgattgtggatgcggggatgaacgacctgttgcgtccggcactgtatcaggcg
tggatgcaaatcctgcccgccgatcgcgccttagtacgcccgagcgcttgctacgatgtg
gtggggccggtgtgcgaaaccagtgattttctcggtaagcagcgagaactggccatcgcc
caaggcgatttgctggtggtgcgctcagctggggcctacggttttagcatgagctcgaat
tataactctcggccacgggcggctgaggtgctggttgacggcaccgaatttcacctgatc
cgagagcgagaaactttaagcgatttatggcgcggggagcacctgctgccgtga
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