Plesiomonas shigelloides: SAMEA2665130_3037
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Entry
SAMEA2665130_3037 CDS
T04378
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00730
Thiamine metabolism
pshi01100
Metabolic pathways
pshi01240
Biosynthesis of cofactors
Module
pshi_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SAMEA2665130_3037 (thiC)
Enzymes [BR:
pshi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SAMEA2665130_3037 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
SBT62447
LinkDB
All DBs
Position
1:complement(3342099..3344075)
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AA seq
658 aa
AA seq
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MSSHLVEKSAVNSRSQQRAAAREFLATLQGAAHPNSEKVFLPGSRPDLQVGMRAISVSPT
LVGGDPAAPRYEPNAPVMVYDTSGPYTDPAATLDVSRGLPRLREEWISERADTQWLAEPS
SGYTRQQQAEAQPLDQPFPQRAPIRRAQLGKAVTQLHYARQGIITPEMEYIALRENMTAW
SEAQGVLAQQHAGEAFGAQIPSQITPEFVRQEVAAGRAIIPLNINHPEAEPMIIGRHFMV
KVNANIGNSSVTSSVEEEVEKLVWATRWGADTVMDLSTGRRIHETREWILRNSPVPIGTV
PMYQALEKVNGVAEDLSWAVMRDTLLEQAEQGVDYFTLHAGLLLRHIPLTAERLTGIVSR
GGSIMAKWCLAHHQENFLYTHFREICEICQAYDVSLSLGDGLRPGSIHDANDAAQFAELH
TLGELTKIAWEYDVQVMIEGPGHVPMQLIKANMDEQLKHCGGAPFYTLGPLTTDIAPGYD
HITSGIGAAMIGWYGCAMLCYVTPKEHLGLPDKNDVKTGLITYKLAAHAADLAKGHPGAQ
RRDNALSKARFEFRWEDQFNLSLDPDTARAYHDATLPQASGKVAHFCSMCGPKFCSMKIS
QDIRSYAQAQAADVSVATDSTALGSTASDAGMRQMAQEFRARGAELYHPADSAEVPNA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcatcttgttgaaaaatcagcagttaactctagatcgcagcagcgcgccgcc
gcgcgtgaatttctggctaccttgcagggtgctgcacatcccaattcggaaaaagtattt
ttgccgggcagtcgccctgacttgcaggtgggcatgcgcgcaatcagcgtgtcgccgacg
ttagtgggcggcgatccggctgcgccacgctatgagcccaatgcgccggtgatggtgtat
gacacttcaggcccttataccgatccggcagctaccttggatgttagccgcggcttgccg
cgcctgcgtgaagaatggatcagtgaacgggcagatacccagtggctggctgaaccgagc
tcaggctatacccgccagcaacaggcggaggcgcagccattagatcaaccttttccgcag
cgtgcaccgattcgacgtgcgcagctgggtaaagcggtgactcagctgcattacgcacgg
caaggcattattacgccggagatggagtacattgcgctgcgtgaaaacatgacggcatgg
tccgaggcgcaaggggtattggcgcagcagcatgccggtgaagcgttcggcgcgcagatc
ccatctcaaattacgccggagtttgtacgccaagaagtggcggccggccgcgcgattatt
cctttaaatatcaaccatccagaagctgagccgatgattattggccgccactttatggtg
aaggtgaatgccaatatcggtaactcttcggtcacctcttcagtggaagaggaagttgag
aaactggtgtgggccacccgttggggcgccgatacggtgatggatctttccactggtcgg
cggatccacgagacgcgcgagtggatcttacgcaatagcccagtgccgatcggtaccgtg
ccgatgtatcaggcgttggaaaaagtgaatggggtggcggaagacctgagctgggcggtg
atgcgcgataccctgttagagcaggccgagcaaggggtggattactttaccctgcatgcc
ggtttgctgctgcgtcatattccgctgaccgctgagcgtctgaccggcattgtctcgcgc
ggtggctcgattatggccaagtggtgtctggcacatcatcaagaaaacttcctgtatacc
cattttcgtgagatttgcgaaatctgtcaggcgtacgatgtgtccctctcgttgggtgat
ggcttgcgcccgggctcaattcacgatgccaatgatgccgcgcagtttgccgaactgcat
accttaggcgaactgaccaaaattgcctgggaatatgatgtacaggtgatgattgaaggg
ccggggcatgtgccgatgcagctgattaaagccaatatggatgagcagctcaagcactgc
ggcggtgcgcctttctataccttggggccactgactaccgatattgcaccgggctatgat
cacatcacttccggcattggtgcggcgatgattggttggtatggctgcgcgatgctgtgc
tatgtcacgccgaaagagcatctggggttgccggataagaacgatgtgaaaaccggcctc
atcacctacaagctagcggcacatgctgctgatttggcgaaaggccatccgggggcgcag
cgccgcgataatgccttgtccaaggcgcgttttgagtttcgctgggaagatcagtttaac
ttatccctcgaccccgatactgcgcgggcctatcacgatgccaccttgccgcaggcatcg
ggcaaagtcgcgcatttttgctcgatgtgtggcccgaaattttgttcgatgaagatctcg
caagatatccgcagctatgcgcaagcacaggcggctgacgtgtcagtggctaccgactcg
accgcgcttggctctacggccagcgatgctgggatgcgccagatggcgcaagagtttcgt
gcgcgcggtgctgagctgtatcacccggctgactcggcggaggtgccaaatgcctga
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