Pseudomonas sp. HLS-6: CS390_01080
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Entry
CS390_01080 CDS
T12031
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pshl Pseudomonas sp. HLS-6
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshl03036
]
CS390_01080
Chromosome and associated proteins [BR:
pshl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CS390_01080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Tyr_recomb_halo_M
MSMEG_6518_N
Ribosomal_S15
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
ATR81232
LinkDB
All DBs
Position
complement(249947..250846)
Genome browser
AA seq
299 aa
AA seq
DB search
MQRQLDAFCAYLRNERQVSPHTQLAYRSDLDNVLAYCAKAGINSWNDLQIQQLRQFVARQ
HQHGQSSRSLARMLSAVRGFYRYLNREGLCSHDPATGLSAPKGERRLPKTLDTDRALQLL
DGAVEDDFIGRRDQAILELFYSSGLRLSELTSLNMEQLDLAAGLVQVHGKGSKTRVLPVG
RKAREALQQWFKLRGMSAPEDGAVFVTRQGRRLGRRAIQLRVQAAGVRELGQNLHPHMLR
HSFASHLLESSQDLRAVQEMLGHADIATTQIYTHLDFQHLAAVYDSAHPRAKRSKDSDT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgccagttggacgcgttctgtgcatacctgcgtaacgaacgtcaggtgtcaccg
catacccaactggcctaccggagcgacctcgacaatgtcctggcgtactgcgccaaggcc
ggcatcaacagctggaacgacctgcagatccaacagctgcgtcagttcgttgcccgtcag
catcaacacgggcagtcctcacgtagcctggcccgcatgctctcggccgtgcgcggtttc
tatcgctacctcaaccgtgaagggttatgcagccacgacccggccaccggtctgtcggcc
cccaaaggcgagcggcgcctgcccaagaccctggacaccgaccgcgccctgcaattgctc
gacggagccgttgaagacgacttcatcggccggcgcgatcaggccatcctggagttgttc
tactcctccgggctgcgcctgtcggagctgaccagcctgaacatggagcaactggacctc
gccgcaggcctggtacaggtgcatggcaaaggcagcaagacccgcgtactgccggtgggc
cgcaaagcccgcgaggccctgcaacagtggttcaaattgcgcggcatgagcgcgcctgaa
gatggcgcggtgtttgtcacccgccagggccgtcgccttggccgtcgggcgatccaactg
cgggtacaggccgccggcgtaagggagctggggcaaaacctgcacccacacatgttacgg
cactcttttgccagccacctgctggagtcctcccaagacctgcgcgccgtccaggaaatg
ctcggccatgccgacatcgccaccacgcagatctacactcacctggacttccaacacttg
gctgcggtttacgacagcgcccatccacgggccaagcgcagtaaggacagcgacacatga
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