Pseudomonas sp. HLS-6: CS390_05190
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Entry
CS390_05190 CDS
T12031
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pshl Pseudomonas sp. HLS-6
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshl03000
]
CS390_05190
Transcription factors [BR:
pshl03000
]
Prokaryotic type
Helix-turn-helix
Other families
CS390_05190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
CHRD
HTH_AsnC-type
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ATR81989
LinkDB
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Position
complement(1159340..1160209)
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AA seq
289 aa
AA seq
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MDRVRNLLEQIQGRLEELNKAERKVAEVILLNPQQATRFSIAALAQAAKVSEPTVNRFCR
SFDVSGYPELKLQLAQSLASGAAYVSRAVEADDDPAAYTQKIFGSAIASLDSACQQLDPQ
LISRAVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTG
ELFVIISYTGRTRELVEVARLARENGASVLGLTAAGSPLAKASSLSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNASRYPIDDELN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgcgaaacctcctggaacagatccagggccgccttgaagagctgaacaag
gccgagcgcaaagtcgccgaagtcatcctgctcaaccctcagcaagcgacgcgcttcagc
attgccgccctggcccaggcggccaaggtcagcgaaccgaccgtgaaccgcttctgccgc
tcgttcgatgtcagcggctaccctgaactcaaactgcaactggcgcagagcctggccagt
ggcgccgcctacgtcagccgcgctgtcgaggccgacgatgatccggccgcctacacccag
aaaatcttcggcagtgccatcgcctcgctggacagtgcctgccagcaactcgacccgcag
ttgatcagccgcgccgtcgacatgctgatccaggcccggcagatccacttcttcggcctc
ggcgcctcggccccagtggctctggatgcccaacacaagttcttccgtttcaaccttgcc
gtgtcggcccatgccgatgtcctgatgcagcgcatgctggcgtcggtggcgcacaccggc
gaactgttcgtgatcatttcctacacagggcgcacccgcgaactggtcgaagtcgcacgc
ctggcccgtgaaaacggtgcctcggtgctcggcctgaccgctgccggctcaccactggcc
aaggccagcagccttagcctgaacatcccgctgccggaagacaccgacatctacatgccg
atgacctcgcggatcatccagctgacggtactcgatgtactggcaaccggcatgaccctg
cgccgtggcgtggacttccagccacacctgcgcaaaatcaaggaaagcctcaacgccagc
cgctacccgatcgacgacgaactcaattga
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