Pseudomonas sp. HLS-6: CS390_06730
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Entry
CS390_06730 CDS
T12031
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl00061
Fatty acid biosynthesis
pshl00071
Fatty acid degradation
pshl01100
Metabolic pathways
pshl01212
Fatty acid metabolism
pshl02024
Quorum sensing
pshl04146
Peroxisome
Module
pshl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CS390_06730
00071 Fatty acid degradation
CS390_06730
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CS390_06730
09145 Cellular community - prokaryotes
02024 Quorum sensing
CS390_06730
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pshl01004
]
CS390_06730
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshl04147
]
CS390_06730
Enzymes [BR:
pshl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CS390_06730
Lipid biosynthesis proteins [BR:
pshl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CS390_06730
Exosome [BR:
pshl04147
]
Exosomal proteins
Exosomal proteins of breast milk
CS390_06730
Exosomal proteins of breast cancer cells
CS390_06730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ATR82274
LinkDB
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Position
1461733..1463430
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AA seq
565 aa
AA seq
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MIENFWKDKYPTGIAAQINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAWLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLNKGRGQPIKEANPASSDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGSHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNADFRKLDFSALKITLSGGMALQMSVAERWRDVTGCAICEGYGM
TETSPVAAVNPAERNHIGTIGIPVPSTLCKVIDDDGRELALGEVGELCIKGPQVMKGYWQ
REDATAEILDADGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGEVIKLFIVARPGVTLTKEQVMEHMRANVTGYKVPRFIEFRDALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaacttttggaaggataagtacccaaccgggattgccgcgcagatcaatccg
gatgagtacccgaatatccaggcggtattgaagcagtcctgccaacgtttcgctgataaa
ccggcctttagcaacctgggcaaaaccttgacctacggagagttgtacgaactttccggg
gcatttgccgcctggttgcaacagcacactgacttgcagcccggcgatcgtatcgcggtg
cagttgccaaacgtattgcagtaccccgttgcagtgttcggtgccatgcgggccggcctg
atcgtggtcaataccaacccgttgtataccgcacgggaaatggaacatcagttcaatgat
tccggcgccaaggcgctggtctgtttggccaacatggcacacctggcggaaaaggttgtg
cccaagacccaagtcaaacacgtcattgtcaccgaagttgccgatctgttgccaccgctc
aagcgtttgttgatcaacagcgtcatcaagtacgtgaaaaagatggtgccggcgtatcac
ctgcccaaggcggtcaagttcaatgatgtcttgaacaagggccgtggtcagccgatcaag
gaagccaatccggccagttccgatgtggcggtattgcagtacaccggcggcaccaccggg
gtggccaaaggggcaatgctcacccaccgcaacctggtggccaacatgctgcagtgcagg
gcgctgatgggctccaacctcaatgaaggctgcgaaatcctgattacgccgctgccgctt
tatcacatctatgccttcaccttccattgcatggcgatgatgctgattggcagccacaac
atcctgatcagcaacccgcgtgacttgccggccatggtcaaggaactgtcgaagtggaag
ttcagcggctttgtcggcttgaacaccctgttcgtggccctgtgcaacaacgccgatttc
cgcaagctggacttctcggcgctgaagatcaccctgtcgggaggcatggcgttgcagatg
tcggttgccgagcgctggagagacgtcacaggctgtgccatttgtgaaggctacggcatg
accgaaaccagcccggtagccgccgtcaacccggccgaacgcaaccatatcggcaccatt
ggcattccggtgccctcgacactctgcaaggtgatcgatgatgacgggcgtgaactggca
ctgggcgaagtgggtgagttgtgcatcaaaggcccgcaagtgatgaagggctactggcag
cgcgaggatgcgacggccgagatccttgatgccgatggctggctcaagaccggcgacatt
gccgtgattcaggcagacggttacatgcgcatcgtcgaccgcaagaaggacatgattctg
gtgtctggcttcaacgtctatccgaacgaacttgaggatgtgctggctgcgctgccgggt
gtattgcagtgcgcggcaatcggcgtgccggatgagaaatctggtgaagtgatcaagctc
ttcatcgttgcccgccccggcgtcacgctgaccaaggagcaggtgatggagcacatgcgc
gccaacgtcacaggttacaaggtgccgcgcttcattgagtttcgtgatgcactgccgacc
accaacgttggcaagatactgcgccgcgaactgcgcgatgaagaactgaagaaactgggt
ctgaagaagattgcctga
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