Pseudomonas sp. HLS-6: CS390_07395
Help
Entry
CS390_07395 CDS
T12031
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl02020
Two-component system
pshl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CS390_07395
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CS390_07395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pshl02022
]
CS390_07395
02035 Bacterial motility proteins [BR:
pshl02035
]
CS390_07395
Two-component system [BR:
pshl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CS390_07395
Bacterial motility proteins [BR:
pshl02035
]
Flagellar system
Flagellar assembly proteins
Others
CS390_07395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA
HTH_30
FleQ
AAA_2
MerR
HTH_20
AAA_3
Mg_chelatase
AAA_19
HTH_24
nSTAND3
HTH_23
AAA_22
HTH_11
Sigma70_r4_2
AAA_7
nSTAND6
HTH_28
DUF2249
HTH_17
TIP49
ATPase
HTH_Mga
HTH_1
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
ATR82392
LinkDB
All DBs
Position
1605457..1606848
Genome browser
AA seq
463 aa
AA seq
DB search
MTAIKVLLVEDDRVLRQALGDTLMLGGFDYLAVGSAEEALAVVAEQAFSLVVSDVNMPGM
DGHQLLELLRARHPQLPVLLMTAHAAVERAVQAMRQGAVDYLVKPFEPRALLDLVGRHAV
GAFDKAEGDGPVAREPASAQLLELAAKVARSDSTVLISGESGTGKEVLARYIHQQSPRAS
QPFVAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQANGGTLLLDEISEMPLGLQ
AKLLRVLQEREVERVGGRKPIALDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWR
PLRERSADILPLAERLLARHVNKMKHAPVVLSPRAQACLQAYPWPGNVRELDNAIQRALI
LQQGGVIEAEDFCLAGALPTLTPTAVEPQSSAPSLSAPEATGLGDDLRRHEFQMIIDTLR
AERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEASLYASGG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaatcaaggtgttgctggtcgaggatgatcgggtgctgcgccaagcgcttggc
gataccctgatgctcggtggtttcgactatctggcggtgggctcggcagaggaagcgctg
gcggtggttgctgaacaggccttcagcctggtggtcagtgatgtgaacatgccgggcatg
gatggtcatcagttgctggagctgttgcgggcgcgccatccgcagttgcccgtactgttg
atgaccgcccatgccgccgttgaacgtgcggtgcaggccatgcgccaaggggctgtcgat
tacctggtcaagccattcgaacctcgcgccttgctggatctggtagggcgccatgccgtg
ggcgcgttcgacaaggcagagggcgatgggccggtggcgcgtgagcctgccagtgcgcaa
ctgctggagttggcggcgaaggttgcgcgcagtgattctacggtgctgatttctggtgaa
tccggtaccggcaaagaggtgttggcgcgctacattcatcagcagtcgccgcgggccagt
cagccgtttgtggcgatcaactgtgcggcgattcccgacaacatgcttgaagcaaccttg
ttcgggcatgagaagggatcatttaccggggccattgctgctcaggcggggaagttcgag
caggcgaatggcggtaccttgctgctcgatgagatttccgagatgccgcttggcctgcag
gccaagcttttgcgtgtgctgcaggagcgcgaggtggagcgggttggcgggcgtaagccg
attgcgctggatattcgcgtagttgcaaccaccaaccgtgatttggccggtgaagtggcg
gctggacggttccgcgaagacctctactatcgcttgtcggtgtttcccctggcctggcgc
cccttacgtgagcgcagtgccgatattctgccgctggccgagcgcttgctggcgcgccac
gtcaataaaatgaaacacgctccggtggtgttgtcgccccgtgcgcaagcgtgcctgcaa
gcgtatccgtggcctggcaacgtgcgggagctggacaatgctattcagcgtgcgctgatt
ctgcagcagggtggcgtgattgaggctgaggatttttgcctggccggcgctttgcccaca
ctgacgccaactgcagtcgagccacagtcgagtgcgccgtcgctgagcgcgcccgaagcc
actgggttgggtgatgacttgcgtcggcatgagttccagatgatcatcgacacccttcgc
gccgagcgcggtcgccgcaaagaggccgccgagcgattgggcatcagcccgcgaaccctg
cgttacaagcttgcgcaaatgcgtgatgcggggatggatgtcgaagccagcctgtacgcc
tcgggcgggtaa
DBGET
integrated database retrieval system
