Pseudomonas sp. HLS-6: CS390_16020
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Entry
CS390_16020 CDS
T12031
Name
(GenBank) ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CS390_16020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins
CS390_16020
Enzymes [BR:
pshl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
CS390_16020
DNA replication proteins [BR:
pshl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
CS390_16020
Prokaryotic type
Elongation factors (bacterial)
RNase H
CS390_16020
Elongation factors (archaeal)
CS390_16020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
T2SS_PulS_OutS
Motif
Other DBs
NCBI-ProteinID:
ATR83937
LinkDB
All DBs
Position
complement(3435245..3435691)
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AA seq
148 aa
AA seq
DB search
MSESVEIYTDGACKGNPGPGGWGALLICKGVEKELWGGERETTNNRMELMAAIRALEALK
RSCEVLLVTDSEYVMKGINEWMVNWKKRGWKTAAKQPVKNADLWQQLDEQVGRHQVTWKW
VRGHTGHDGNERADQLANRGVDEVRGLR
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagcgtcgagatctacaccgatggtgcctgcaagggtaaccctggccccggt
ggctggggcgccctgctgatttgcaagggtgtggaaaaggagttgtgggggggcgagcgc
gagacgaccaacaaccgtatggagttgatggccgccatccgtgcgctggaagccctcaag
cgcagttgcgaagtgttgttggtcaccgactcggaatatgtcatgaagggcattaacgag
tggatggtcaattggaagaaacgcgggtggaaaaccgctgccaagcaaccggtgaagaat
gccgacctgtggcagcagcttgacgaacaggtcggtcggcaccaggtgacctggaagtgg
gtgcgcggccacactggccatgacggcaacgagcgtgccgaccagttggccaaccgcggt
gtcgacgaagtgcgcggtctgcgctga
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