Pseudomonas sp. HLS-6: CS390_16670
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Entry
CS390_16670 CDS
T12031
Name
(GenBank) helicase
Organism
pshl Pseudomonas sp. HLS-6
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Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
AAA_22
SNF2_assoc
Motif
Other DBs
NCBI-ProteinID:
ATR84050
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Position
3562905..3565211
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AA seq
768 aa
AA seq
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MPDRVIAPLPPQPRLWLGSIEFSAFEPRNGRMQRYTQHRAALAFGYAGDYVSGTLHARQA
QPLQRHLSAEQSLRETLLSLGFKVATRQSKALPESAGEPFELPSEAAWLRFVLNDLPHLR
EQGWQIICADDFAFDLTPVDDWYAQVVETPERDWFDLELGIVVNGERLSLLPILLNLLRT
HPELLNSAHLAKRRDDEQILVPIPHPHAPRKTLQIALPYGRLKPVLATLGDFYLREPGET
TVRLASPDAARLNALLELPLTWEGGDRVRALGERLRDIRTQAVTTPEGLKATLRPYQLEG
LSWMQALRELDVGGILADDMGLGKTLQTLAHLLTEKNAGRLDRPAMVVMPTSLIPNWQDE
AERFAPQLRVLALQGIGRRQYFDKLADYDLLLTTYALLPKDLDHLKHLPLHVLILDEAQY
IKSPTSKAAQAARQLEARQRLCLSGTPLENHLGELWSLFHFLLPGWLGDNKAFNRDYRVP
IERQGDEERLQHLNARIKPFLLRRTKEQVATELPAKTEMIHWVDLTEAQRDVYETMRLAM
DKKVRNEISRKGVARSQIIILEALLKLRQVCCDLRLVKSEAAGPSRSANSGKLNSLLEML
EELLAEGRRVLLFSQFTSMLSLIGEELQQRGIDYALLTGDTRDRRAPVADFQSGRLQIFL
ISLKAGGVGLNLTAADTVIHYDPWWNPAAEQQATDRAYRIGQEKPVFVYKLITRGTVEEK
IQQLQQEKSALAAGVLDGRQAGDWKLEDDDIDALLAPLPGRRHPPKSG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccgcgtgatagccccgcttccaccccagccacgcctgtggctgggcagcatt
gagttcagcgccttcgagcctcgcaacgggcgcatgcagcgctacacccaacaccgcgcc
gcactcgccttcggctatgccggcgactatgtcagtggcaccctgcatgcgcgtcaggcg
caacccctgcagcgccacctgagcgccgagcaaagcctgcgcgaaacactcctgagcctg
ggcttcaaggttgccacccggcagagcaaagccttgccggaaagtgccggcgagccgttc
gagctccccagcgaggcagcctggttacgctttgtcctcaatgacctgccacacttgcgc
gagcaaggctggcaaatcatctgcgctgacgacttcgcttttgacctcaccccggtcgac
gactggtacgcccaggtcgtcgagacgcccgaacgcgactggttcgacctcgaactgggc
atcgtggtcaatggcgagcgcttgagcctgttgccgatcctgctcaacctgctgcgtacc
cacccggaattgctcaacagcgcgcacctggccaaacgccgtgacgacgagcagatcctg
gtgcccatcccccaccctcatgcaccgcgcaagacgcttcagatcgccctgccgtacggg
cggctcaaaccggtattggccaccctgggggatttctacctgcgcgagccgggcgagact
accgtgcgcctggctagccccgacgcggcgcgcctgaacgccctgctcgagctgccactg
acctgggaaggcggtgaccgggttcgcgcgctgggcgaacgcctgcgcgatattcgtacc
caggccgtcaccacccctgaaggcctgaaagccaccctgcgcccctatcagcttgaaggc
ctgagctggatgcaggcgctgcgcgaactggacgtcggcggcatcctggctgacgacatg
ggcctgggcaagacgctgcaaaccctggcccacctgctgactgaaaaaaacgcaggccgt
cttgatcgaccggcaatggtggtaatgcccaccagcctgatccccaactggcaggatgaa
gccgagcgctttgctccgcagttacgagtactggcattgcaaggcattggtcgccgacag
tacttcgacaagctggcggactacgacctgctactgacaacctatgcgctgctgcccaag
gaccttgaccacctcaagcacctgccactgcacgtactgatcctggacgaagcccagtac
atcaagagccccaccagcaaggccgctcaggctgcgcgacagctggaggcgcggcaacgc
ctgtgcctgagtggtacgccactggaaaaccacctgggcgaactctggtcactgttccac
ttcctgctgccgggatggctgggcgacaacaaggcgttcaaccgcgattaccgggtgcct
attgagcgccagggtgacgaagaacgcttgcagcacctgaatgcacggataaagcccttc
ctgctgcgccgaaccaaggagcaggtggcaaccgaactgccggccaagaccgaaatgatc
cactgggtcgacttgaccgaagcacagcgcgacgtctatgaaaccatgcgcctggccatg
gacaagaaagtccgcaacgagatcagccgcaagggtgttgcccgcagccagatcatcatt
cttgaggcactgctgaagctgcgccaagtctgttgcgacctgcgtctggtcaaatccgaa
gcagccggcccatcacgcagcgcgaactcgggcaaactcaacagcctgctggagatgctt
gaagaattgctcgccgaaggccgtcgagtgctgctgttctcgcagttcaccagcatgctt
tcgctgattggcgaggaactgcaacagcgcggtatcgactatgcgttgttgacgggtgac
acccgcgaccgacgcgcaccggttgcagacttccagagcggccggctgcagattttcctg
atcagcctcaaggccggtggcgtcggcctcaacctcacggcagccgacaccgtgattcac
tacgacccatggtggaacccggcagccgaacagcaagcgaccgaccgtgcataccgcatt
ggccaggaaaaaccggtgttcgtctacaagctgattacccgcggcaccgtggaagagaag
atccagcagctgcagcaggagaagtctgcactggcagccggtgtactggatgggcgccag
gccggagactggaaactggaagacgacgatatcgacgcactactggcacccttgccaggc
cgtcgtcacccgcctaaaagcgggtga
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