Pseudomonas sp. HLS-6: CS390_19400
Help
Entry
CS390_19400 CDS
T12031
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CS390_19400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins
CS390_19400
Enzymes [BR:
pshl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CS390_19400
DNA repair and recombination proteins [BR:
pshl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CS390_19400
Prokaryotic type
CS390_19400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATR84541
LinkDB
All DBs
Position
complement(4141707..4142399)
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKQALRSEFDQPYMQELKDFLRQEHAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGTPTPPSLLNIYKELQRDLNIDIANHGCLQHWA
EQGVLLLNTTMTVERGNAASHANKGWQHFTDRIIEVVSEQQPNLVFLLWGAHAQSKRKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSQTNRFLEQRGLAPIDWRLPPA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacgaccgtatcaaactcgaacccagctggaagcaggccttgcgcagcgag
ttcgaccagccctacatgcaggagctgaaagactttctgcgccaggaacatgctgcaggc
aaagagatctacccgccagggccgatgattttcaatgcgctgaattccacgccgctggat
aaagtcaaagtggtgattctcggccaagacccgtaccacggccccggtcaggcccatggt
ctgtgtttttcggtgcaaccaggtacgcctacaccgccgtcgttgctgaacatttacaaa
gaactgcagcgcgacctgaacatcgacattgccaaccatggctgcctgcagcactgggct
gaacaaggcgtgttgctgctcaataccaccatgactgtcgagcgaggcaatgcggcgtcc
catgccaacaagggctggcagcacttcaccgaccggattattgaagtggtgagtgagcag
cagccaaacctggttttcctgctgtggggcgcgcatgcgcaaagcaaacgcaaattgatt
gatgccaccaagcatctggtcctgacgtcggtgcatccatcgccgttgtcggcttaccgt
ggttttctcggatgtggccatttcagccagaccaatcgcttcctcgagcagcgtggcctg
gcgcctatcgattggcgcctgccgcctgcgtaa
DBGET
integrated database retrieval system
