Pseudomonas sp. HLS-6: CS390_20755
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Entry
CS390_20755 CDS
T12031
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pshl Pseudomonas sp. HLS-6
Pathway
pshl00550
Peptidoglycan biosynthesis
pshl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CS390_20755 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pshl01003
]
CS390_20755 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshl01011
]
CS390_20755 (mrcB)
Enzymes [BR:
pshl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CS390_20755 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CS390_20755 (mrcB)
Glycosyltransferases [BR:
pshl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CS390_20755 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CS390_20755 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
ATR84779
LinkDB
All DBs
Position
complement(4419426..4421747)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTQSSRTPKKRPSGRARALLGWALKLSLVGLVVLAGFAIYFDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKDDFLIELDALGYRRESVANGPGAAAVSGNTVDINTRGFQFYEG
LEQAQAVQVRFSGDYVAGLSGANGSKLAVVRLEPLLIGGLYPKNLEDRILIKLDQVPPYL
LETLVAVEDRDFYSHFGVSPKSIARAIWVNTSSGAMRQGGSTLTQQLVKNFYLTNERSLS
RKLTEALMAMLLELHYDKREILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSYYNPRRYPERATVRRNLVLDLLAEQGVATPEAVEAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAEASVTDTFKRLAGR
KGADEVEAAMVVTNPETGEVQALIGSRQPGFAGFNRAVDAVRPIGSLVKPAVYLTALEKP
SQYTLTSWVQDEPFSVKGADGQVWKPQNYDRRSHGTIYLYQGLANSYNLSTAKLGLEVGV
PNVLKTIGRLGVEVDWPAFPSMLLGAGGMSPMQVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPGSIYLVQSAMQRVMREGTGRSVYSVLPSSLTLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNVVLA
WVDAHSGQGSDASCPGAVQMPYIRGSEPPPGPACGGESAPAESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccaatcttcccgtacccccaaaaaacgtccctctggccgtgcgcgcgcc
ctgctgggctgggctttgaagctcagccttgtcggtctcgtcgtgctcgcgggctttgcg
atttatttcgatgcggtagtccaggagaaattctctggcaagcgctggacgatcccggcc
aaggtatatgcccggccgctggagctgttcgtcggccagaaactcagcaaggacgacttc
cttatcgagcttgatgccttgggctatcggcgcgagagcgtcgccaatgggcctggtgcc
gctgctgtcagtggtaataccgtcgatatcaatacccgtggcttccagttctatgaaggt
ctggagcaggcccaggcggttcaagtacgtttctcgggcgattacgttgccgggttgagt
ggagccaatggctcgaaactggccgtggttcgcctggagccgctgctgatcggcgggttg
tatccgaagaaccttgaagaccgcatcctgataaaactcgatcaggtgcccccgtacctg
cttgaaaccctggttgccgtggaagaccgcgacttctattcgcactttggtgtttcgccc
aagtcgattgcacgggccatctgggtcaacacctcatccggtgccatgcgtcagggtggc
agtaccctgacccagcagttggtcaagaacttctacctgaccaatgagcgcagcctcagt
cgcaagctgacggaagccctgatggcgatgttgcttgagctgcattacgacaagcgcgag
atcctcgaggcctacctcaacgaggtgttcattggccaggatggtcagcgcgcggtgcat
ggctttggtcttgccagccagtttttcttcagtcagccgttgtcagagctcaagctgcat
caggtcgcgttgttggtgggcatggtcaaggggccttcctactacaacccgcggcgctac
cccgagcgtgcaacggtgcggcgtaacctggtgctcgacttgctggccgagcagggcgtt
gcaaccccggaggccgtcgaggctgcgaagaaaatgccgttgggcgttaccaagcgtggc
agcctggccgacagttccttcccgggcttccttgacctggtcaaacgccaactgcgtcag
gactatcgtgacgaagacttgaccgaagaaggcctgcggatctttaccagcttcgatccg
attctgcagatgaaggcggaggcatcggtcactgacaccttcaagcgccttgccgggcgc
aagggggcggatgaagtcgaggcagccatggtggtgaccaatccggaaaccggtgaggtc
caggcgctgataggcagtcgccagcccggttttgccggtttcaaccgtgctgtggatgct
gttcggccgattggctctctggtcaagccggccgtctacctgaccgcgttggaaaaaccc
agccagtacacgctcacgagctgggtccaggatgagcccttttcggtcaaaggtgccgac
ggccaggtatggaagccgcagaactacgatcggcgatcccatggcaccatctacctctat
caggggctggcgaactcttacaacctttccacggccaaacttggtctggaagtgggtgta
cccaatgtgttgaaaaccattggccgtttgggtgtcgaagtcgattggccggcgttcccg
tcgatgttgctgggggcgggcggcatgtcgccgatgcaggttgctaccatgtaccagacc
ctggccaatggtggtttcaatacgccgatgcgcggtattcgcagcgtactgacggctgag
ggtgagccactcaagcgctacccgttccagatccagcagcgttttgatccaggctccatc
tatctggtgcagagcgccatgcaacgggtcatgcgtgaaggcaccggacgttcggtttac
agtgtcttgccaagctctctgactttggccggcaagaccggtaccagtaacgactcgcga
gacagttggttcgcaggtttcagtcaggacctgctggcagtcgtctggttggggcgtgac
gacaatggcaagacgccgttcacgggggccaccggcgcattgcaggtttggaccagtttc
atgcgcaaggccgacccgcttcctctggatatgccgcagccagataatgtggtgctggcc
tgggttgatgcccattccgggcaagggtcggacgcaagctgcccgggcgcggtccagatg
ccgtatattcgcggcagcgaaccgccccccggtcctgcctgtggtggtgaatccgcgcca
gccgaatcggtaatggactgggtcaagggttggatgaattga
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