Pseudomonas sp. HN11: LVW35_01160
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Entry
LVW35_01160 CDS
T11745
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
pshn Pseudomonas sp. HN11
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LVW35_01160
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
OB_PDCD11
T2SSK
HHH_6
DUF22
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UII71814
LinkDB
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Position
complement(245562..247886)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADGLFNDPSLTPDTEAARFIDAEKGIADVKAALEGAKYILMERFAEDASLLEKLRT
YLKQEAILSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
DELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDAAE
TEAINVFAHNLHDLLLSAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLAILAALCAKHGVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASV
YSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDENGAFKTRAALKKVARL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAETNRDIRSLIGDAAFLKRLDP
KQYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQLGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKIDGARGARPGSTPRQSQNNAPRKETVTTAPTNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaagaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggttccacggtgcccttcatcgcccgttaccgtaaa
gaagtgaccggcagcctcgacgacattcaattgcgtcacctggaagagcgcctacgctac
ctgcgagaactcgacgaacggcgcatcagcatcctcgccagcatcgaggaacaaggcaag
ttgacgcctcaactcgagcgcgacatcaagctcgccgacaccaagacccgcctcgaagat
ctttacctgccgtacaaacagaaacgtcgcaccaaaggccagattgccctggaggctggt
ctgggcgaactcgctgacggtctgttcaatgatccttcgttgaccccggacaccgaagct
gcccggttcatcgacgccgaaaaaggcatcgccgacgtcaaggccgccctcgagggtgcc
aagtacattctcatggagcgcttcgccgaagacgccagtctgctggaaaaactgcgcact
tacctgaagcaggaagccatcctcagcgcccgcgttatcgccggtaaagaggaagagggc
gccaagttccgcgattacttcgaacacgacgaaccgctcaaaagcatgccgtcccaccgt
gcactggcgattttccgcggtcgtaacgaaggcattctcagttccgcgctgaaagtcggc
gacgagctgccgggcaccatgcacccgtgcgaaggcatgatcggccaacaattcggcatc
cagaatcagaaccgtcctgcagacaagtggcttggtgaagtcgtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacttgctgggcgagttgcgcgacgccgccgaa
accgaggcgatcaacgtcttcgcccacaacctgcacgacctgttgctgtcggccccggcc
ggcccacgcgccaccctgggcctcgacccgggcctgcgtaccggctgcaaggtcgccgtg
gtcgacgccaccggcaagctgctggaccacgccactgtgtatccgcatgtgccgcataac
aaatgggaccagaccctggcgatcctggccgccctgtgcgccaagcacggcgtggacctg
atcgccatcggcaacggcaccgccagccgtgaaaccgataagctggccgccgagctgatc
aaaaaatatccagccatgaagatgaccaaagtcatggtctccgaggccggcgcttcggtg
tactcggcgtcggaactggcctccaaggaattcccggacctcgacgtgtcgatccgtggt
gcggtgtccatcgcccgtcgcctacaggacccactggccgaattggtcaagatcgaccct
aaatccatcggcgtcggccagtaccagcacgacgtgtctcagctgaaactcgcgcgcggc
ctggatgcggtggtggaagactgcgtaaacgccgtcggcgtggatgtgaacaccgcctcc
gtcgccttgctggcgcgtatttccggcctcaacgccaccctggcgcaaaacatcgtgacc
catcgcgacgaaaacggggcgttcaaaacccgtgcagcgctgaaaaaagtcgcacgcctg
ggtgaaaaaaccttcgaacaagccgctggtttcctacgcgtgatgaacggcgacaacccg
ttggatgcctccgcagtccacccggaagcctacccgctggtgcaacgcatcgccgccgag
accaaccgcgacatccgctcgctgatcggcgacgccgcgttcctcaagcgcctggatccc
aagcagtacaccgatgaaaccttcggtgtgccgaccatcacagacatcctgcaagagctg
gaaaaacccggccgcgacccacgtcccgagttcaagaccgccgagttccaagacggcgtc
gaagacctcaaggacctgcagttgggcatgatcctcgaaggcgtggttaccaacgtgacc
aacttcggcgcctttgtggacatcggcgtgcatcaggacggtttggtgcatatttccgcg
ctttcggagaagttcatcaaggacccgcgtgaagcggtgaaagccggtgacgtggtcaag
gtaaaggtcatggaagtcgacatcccacgcaaacgcgtcggcctgtcgatgcgcatgagc
gacacccccggcgagaaaatcgacggtgcccgtggcgcacgtcctggttctacgccgcgc
cagtcgcaaaacaatgcaccgcgcaaggaaaccgtcaccaccgcaccaaccaacaacgcc
atggcctcgctgttcgccaacgccaaacagttgaagaaacgataa
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