Pseudomonas sp. HN11: LVW35_01315
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Entry
LVW35_01315 CDS
T11745
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pshn Pseudomonas sp. HN11
Pathway
pshn00521
Streptomycin biosynthesis
pshn00523
Polyketide sugar unit biosynthesis
pshn00525
Acarbose and validamycin biosynthesis
pshn00541
Biosynthesis of various nucleotide sugars
pshn01100
Metabolic pathways
pshn01110
Biosynthesis of secondary metabolites
pshn01250
Biosynthesis of nucleotide sugars
Module
pshn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LVW35_01315 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVW35_01315 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LVW35_01315 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVW35_01315 (rfbB)
00525 Acarbose and validamycin biosynthesis
LVW35_01315 (rfbB)
Enzymes [BR:
pshn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LVW35_01315 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
UII71843
LinkDB
All DBs
Position
complement(276882..277964)
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AA seq
360 aa
AA seq
DB search
MRILITGGAGFIGSALVRHLIQHTEHEVLNLDKLTYAGNLESLTRIASNSRYEFVQADIN
DQPTVSAVLARFEPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARGYWQTLAG
PEKKAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVT
EGAVGETYNIGGHNEQKNINVVRQICALLEELAPRHPAGVQKYADLITFVKDRPGHDLRY
AIDASKIERELGWAPEETFETGLRKTVQWYLDNLQWCRRVQDGSYQGQRLGNTDMRDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcattaccggtggcgccggttttatcggttctgctttggtacgtcacctg
attcagcacacagagcacgaagtgctcaacctggacaagctcacctacgctggcaacctg
gaatcgttgacccgtatcgcgtccaacagccgatacgaattcgtccaggccgacatcaac
gaccagcccaccgtcagcgctgtgctggcgcgttttgagccccaggcgatcatgcacctg
gccgccgagtcccatgtcgaccgttcgattgacggcccgtcagactttatccagaccaac
atcgtcggcacttacagcctgttggaagccgcgcggggctattggcaaacactcgccggt
ccagaaaaaaaagccttccggttccaccatatttctaccgacgaggtgtacggcgacctg
catggtgtggacgacctgttcaccgaaaccacgccctatgcgcccagctcgccctactcc
gcgagtaaggcagcgtccgaccatctggttcgcgcctggcagcgcacctatggcctgccg
gtactgctgaccaactgttcgaacaactacggaccgttccacttccccgaaaaactcatc
ccgctggtcattctcaatgccctcgcgggcaagcccttgccggtctatggtgatggtttg
caggtgcgcgactggctgttcgtcgaagaccacgcccgcgcattgctcaaggtggtgacc
gaaggcgcagtaggcgaaacctacaatatcggcggccacaacgaacaaaagaacatcaac
gtcgtgcgacagatctgcgccttgctggaagaactggcgccacggcatccagcgggtgtg
cagaaatacgccgacttaatcacgttcgtcaaagaccgccccggccacgatttgcgttat
gcaatcgacgccagcaagatcgaacgagagctgggctgggcgcccgaggaaacctttgaa
accggactgcgcaagaccgtgcagtggtacctcgataatctgcaatggtgccgcagggtc
caggacggcagttatcagggccaacgattgggcaataccgacatgagggatctgatcgca
tga
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