Pseudomonas sp. HN11: LVW35_06050
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Entry
LVW35_06050 CDS
T11745
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
pshn Pseudomonas sp. HN11
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshn02000
]
LVW35_06050
01504 Antimicrobial resistance genes [BR:
pshn01504
]
LVW35_06050
Transporters [BR:
pshn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LVW35_06050
Antimicrobial resistance genes [BR:
pshn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LVW35_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UII72740
LinkDB
All DBs
Position
1331719..1334784
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AA seq
1021 aa
AA seq
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MGFNLSEWALRNRQIVLFLMILLAVVGTLSYSKLGQSEDPPFTFKAMVIKTNWPGATAQE
VSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSMHSAQIPELWYQVRKKISDI
RQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVTDVGKVELL
GQQDEKVWIELSNLKLATLGLPLAAVQQALQEQNAVSTAGFFETPSERVQLRVSGNFKTV
EEIRNFPIRVGDRTFRIGDVADIHRGFNDPPAPRMRYMGEDAIGLAVAMRDGGDILVLGK
ALEGEFARLQKNLPAGMELRKVSDQPAAVKTSVGEFVQVLAEALAIVLLVSFFSLGVRTG
MVVALAIPLVLAMTFASMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD
RLKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLASWVAAV
VFVPYLGEKLLPDLAKIHAAKHGTDGPDPYGTPFYLRVRRLVEWCVRRRKTVIVLTLLLF
IGSVALFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADQVKRLEALLKEHAGIDNYVA
YVGTGSPRFYLPLDQQLPAASFAQFVVLANTIKERESLRTWLIETLNEQFPDLRSRVTRL
ENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENTHVVNVHLDWEEPSKIVYLNIDQD
RARALGVSTANLSKFLQRSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLAVPTD
NGKSVALSQIATLEYGFEEGIIWHRNRLPTVTVRADIYGKDQPATLVQQILPTLEGVRAE
LPDGYLLDVGGTVEDSTRGQNSVKAGVPLFIVVVLTLLMLQLRSFSRTAMVFLTAPLGLI
GVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLAPWQAIIEATVRR
FRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYASWFRVRKDV
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaatctttccgaatgggcgttgcgtaatcgccagatcgtcctgttcctgatg
atcctgctggcagtggttggcaccttgtcctactccaaactgggacaaagcgaagacccg
ccgttcaccttcaaggccatggtgatcaagaccaactggcccggcgccacggcccaggaa
gtatcgcggcaagtcaccgaacgcattgagaaaaaactcatggagaccggtgagtacgaa
cgcatcgtctcgttctcgcgccccggcgaatcccaggtcaccttcatggcccgagattcc
atgcattcggcgcaaattcctgagctgtggtatcaggtgcgcaagaagatcagcgatatc
cgccagaccttgccgccggatatccaggggccgtttttcaacgatgaattcggcaccacc
ttcggcaacatctacgccctgaccggcgacggttttgattacgccgtgctcaaggactac
gccgatcgtatccagattcagctgcagcgcgtgacggacgtgggcaaggtcgagttgctt
ggccaacaggatgagaaagtctggatagaactgtccaacctcaagctggccactcttggc
ctgcctttggcagcggtgcagcaggcgttgcaggaacagaacgcggtctccaccgccggc
ttctttgaaacgccgagcgagcgcgtgcaattgcgggtgtcgggtaacttcaagaccgtg
gaagagatccgcaacttcccgatacgcgtgggagaccgtaccttccgcatcggcgacgta
gccgacatccaccgtggcttcaacgacccgccggcaccacgcatgcgctacatgggtgag
gatgcgatcggcctggccgtggccatgcgggatggcggcgatatcttggtattgggcaaa
gccctggaaggtgagttcgcacgcctgcagaagaaccttccggccggcatggagctgcgc
aaggtgtcggaccaaccggcggcggtgaaaaccagcgtcggcgaattcgtacaggtactg
gccgaagcactggccatcgtgttgctggtgagtttcttctccctcggtgtgcgtaccggc
atggtggtggccttggcaattccgctggtgctggcgatgacgtttgcctccatgtattac
ctcggcattggtctgcataagatttctcttggcgccttggttctggccctgggcctgctg
gtggacgacgcgatcatcgccgtggaaatgatggcgatcaaaatggagcagggctacgat
cggctcaaggccgccagttttgcctggaccagcaccgcgttcccgatgctcaccggtacg
ctgatcaccgcagcaggcttcttgccgattgccacggcgcaatcgagtaccggtgaatac
acccggtcgatctttcaagtggtgaccattgcgttactcgcctcctgggtggctgcggtg
gtgttcgtgccctacctgggggaaaagctcctgccggacctggcgaaaattcatgctgcc
aagcacggcaccgatgggcctgatccctacggcacacccttctacctgcgcgtaagacgc
ttagtggagtggtgtgtgcgtcggcgtaaaacggtgatcgtcttgaccttgctgctgttt
atcggctcggtggcgctgttccgttttgtgccgcaacagttctttccggcttccggccgc
ctggagctgatggtggatctgaagctggcagaaggtgcgtcgttgagcaacaccgccgac
caggtcaagcgtctggaggccttgctcaaggagcatgcgggtatcgacaactatgtggcc
tatgtcggcaccggttcgccgcgtttctatcttcctctggatcagcaactgccggctgcc
agcttcgcgcagtttgttgtcctggccaacaccatcaaggaacgcgaaagcctgcgcacc
tggctgatcgaaaccctcaacgaacaattccctgatttgcgctcgagggtgacccgcctg
gaaaacggcccgcctgtgggctatccggtgcagttccgcgtgacgggcgaacacatcgaa
gaagtccgcgccctcgcacggaaagtggcggccaaggttcgcgaaaatacccacgtggtc
aacgtgcatctggattgggaggagccgagcaagatcgtctacctcaatatcgatcaggac
cgcgcccgcgcgctcggcgtgagcacggccaatctgtcgaaattcctgcagcgctcgttg
accggttccagtgtcagccaataccgcgaggacaacgagttgatcgagatcctcctgcgc
ggaacggtgcatgagcgcactgagctgtcgttgctgcccagcctggcagtgcctacggac
aatggcaaaagcgtagcgttatcgcagatcgccacccttgagtacggtttcgaggagggc
atcatctggcaccgtaaccgtctacccacggtgaccgtccgcgccgacatttatggcaag
gatcagccggcgacgctggtccagcagattctgccgacccttgaaggcgtgcgcgccgag
ctgccggatggctacctgctggacgtgggcggtactgtcgaggactcaacccgtggccag
aactcggtaaaagccggcgtgccgctgtttatcgtggtggtgttaacgttactcatgctg
caactgcgcagtttctcacgcaccgccatggtgtttctgacggcgccgctgggcttgatt
ggtgtgacgctgttcctgctggtcttccgccagcccttcggtttcgtggccatgctgggg
accattgcactgtcggggatgatcatgcgtaactcggtgatcctggtggaccagatcgag
caggacatcaaggcaggtctggcgccctggcaggcgattatcgaagccacggtccgacgc
ttccgcccgatcgtgctgacagcccttgccgctgtgctggcgatgatcccgttgtcacgc
agtgtgtttttcggcccgatggccgtggcgatcatgggcgggttgattgtggcgacggcg
ctgaccctattgttcttgccggccctgtatgcttcgtggttccgagtgaggaaggacgtc
gcgtaa
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