Pseudomonas sp. HN11: LVW35_06550
Help
Entry
LVW35_06550 CDS
T11745
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pshn Pseudomonas sp. HN11
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshn03021
]
LVW35_06550 (rapA)
Transcription machinery [BR:
pshn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LVW35_06550 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UII72834
LinkDB
All DBs
Position
complement(1440199..1443045)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASPEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDAEWQALIDEARAERERLE
QELHTGRDRLLELNSGGAGDGDALVEEILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSSRVSF
VTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPQHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgccagtatgcgctacggaatgcgccccttactcgcgtgaggttttcgccgggt
gacagcatcacccatttcgaaggctggaaaatgaccgtacaggaagtcgacgacgtcgac
ggcctgctggtgtaccacggcctcaatgggcagaacgagcaggtcaccctgccggaaacc
caactctccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctggcgtggttctcgctgcgctaccacaccctggaacacaccagccgccaattg
cagtcctcgctgtggggcctgggtggcgtgcgggcgcaacctattgctcaccaattgcac
atcgctcgtgaagtcgccgaccgcatcgcgccacgggtattgctggccgacgaagtgggc
ctgggcaagaccatcgaagctggcctggtgatccatcgtcaactgctgtcgggccgcgcc
aaccgcgtgttgatcctggtcccggaaaacctgcagcaccaatggctggtggaaatgcgc
cgccgtttcaacctacaggttgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
accaacccgttcgaagacacccagcttgcgctggttgcgctggaatggctggtggacgac
gagaaggcccaggacgcgctgttcgccgctggctgggacctgttggtcgtcgatgaagct
caccacttggtctggcacgaagaaaaagccagcccggagtacgcactggtcgagcaattg
gccgaagtgattcctggcgtgctgctgctcaccgccactccggaacaactgggccaggac
agtcactttgcacggctgcgcctgctggacccgaaccgtttccatgacctgcaagccttc
cgcgccgagagcgagaactatcgcccggtcgccgaagccgtgcaggaactgttggacaag
gggcgtctctcccctgccgcgcacaaaaccatccagggtttcctcggtaacgaaggggag
gcgctgctcaccgccgtcaacgatggcgacaccgaggccagcgcacgcctggtgcgcgag
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaacacccgcgccgcggtgcaa
ggtttccccgagcgcaagctgcacgcctacccgctgccgaacccggacgaatacctcgag
ttgccgctgggcgaacacgccgagttgtacccggaagtcagcttccagtcgcagccggac
atcgaagaagagaaccgctggtggcgcttcgacccacgggtcgagtggctgatcgaccaa
ctgaaaatgctcaagcgcaccaaggtcctggtaatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcattccggccaccgtgttccacgaaggc
atgaacatcctcgaacgtgaccgcgccgccgcctacttcgccgatgaagagtttggcgcc
caggtgctgatctgttccgagatcggcagtgaaggtcgcaacttccagttctcccaccat
ctggtgctgttcgacctgccgtcccaccccgatttgctggaacagcgcatcggccgtctg
gaccggatcggccagaagcacgtgatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctcaacgccttcctcaacacctgcccg
accggcaacgccttgcagcatcaattcggtccacgcctgctgccgctgctggaaaacgcc
gacgatgctgagtggcaagccctgatcgacgaggcccgtgccgagcgagagcgcctggaa
caagagctgcacaccggtcgcgaccgcttgctggaactcaactccggcggcgcgggtgat
ggcgatgcactggtggaagagattcttgagcaagacgaccagttcgccctgccgatctat
atggaaaccctgttcgacgcgtttggcatcgacagcgaagaccattcggaaaacgcgctg
atcttgaagcccagcgaaaaaatgctcgacgccagctttcccctgggcgacgacgaaggt
gtgaccatcacctacgaccgtaaccaggcactgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcaaggcggtatggatctggtgctgtccggctccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcctggcaccgtgttgctggaactg
ctctacgtcagcgaagtggtcgcgccgcgctcactgcaactgggccgttacctgcccccg
gctgccctgcgctgcctgctggatgccaatggcaacgacctgtcgagccgtgtgtcattc
gtgaccctcaacgatcagttggaaagcgtgccacgggccagcgccaacaagttcatccag
gcccagcgcgaccagctgacgccacggatcaacgccggtgaagagaagatcgccccgcaa
catgccgagcgcgtggccgaggccaagcgtcgcctggcggcggacaccgacgaagaactg
gcgcgcctgaccgcattgcaagcggtcaacccgactgtgcgtgacagtgagttggtcgcc
ctgcgtacccagcgcgaacaaggccttgcgatgctggataaggcggcgctgcgactggaa
gcgattcgagtgctggtagcgggttga
DBGET
integrated database retrieval system
