Pseudomonas sp. HN11: LVW35_12895
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Entry
LVW35_12895 CDS
T11745
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pshn Pseudomonas sp. HN11
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
AAA_16
HTH_28
AAA
HTH_50
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UII74015
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Position
2844971..2846503
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AA seq
510 aa
AA seq
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MRDDLFARLPHPLAYAEALIGWFARLGIEADAMTLPGLCVAAAAQLSECELSQWYWRNEA
TGRLELIAQHRPDALSLSDAICTADFQHEQVLHYVLAHQTALSLEDLTGSAYDCGFLPSG
ATPWRALSCVPLFNRQMTINGVLLCASHHPKNLQDYAATLSRLGSFALTQLALLRSKRCV
DRFTTPADPTPLPRAAFGLVGTSTAMDEAYRLIGKVLHTPYTVLLRGETGTGKEVVARAI
HSAGRRSSKAFVVQNCAAFPEGLLESELFGYRKGAFTGADRNHTGLFDAAHGGTLLLDEI
GDMPLALQAKLLRVLQEGEVRPLGASTAHKVDVRIIAATHRDLAAMVAEGSFREDLYYRL
AQFPIELPPLRERDGDVLLLAREFSQKACAALGRVPVGWSSAALDQLSSHAFPGNVRELK
CLVERAVLLCDEGVILPAHLSLSAPPANESVDATLRQRLERVERVFLIDCLHKNRGNRTR
TARELGVARRTLLYRLARLKIPVGDVRGEC
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagggatgacctgtttgctcgattaccccatccgctggcctacgccgaagccctgatc
ggctggttcgcccgcctgggcatcgaagctgacgcgatgaccttgcctggcctgtgtgtg
gcagcggcagcgcaactgagcgaatgcgaactcagccaatggtattggcgcaacgaagcg
acaggccgacttgagctgattgcccagcatcggcccgatgcgctgtccctcagcgatgcc
atctgcaccgccgactttcagcatgagcaggtcttgcactacgtgctcgctcatcaaaca
gcgctaagcctggaagacctcactggcagcgcctacgactgcggattcctaccgtcaggg
gcgacgccttggagagcgttgtcatgcgtaccgcttttcaatcgacagatgaccatcaat
ggcgtgttgctatgtgccagccatcacccgaaaaacctgcaggactacgccgccaccttg
agccgactgggcagctttgccctgacgcaactggctttgctgcggagcaagcgttgcgta
gaccgtttcacgacgcccgctgatcccacgccgctgccccgcgcggcatttgggttagtc
ggtaccagtacggccatggatgaagcgtaccgcctgatcggcaaggtgttgcataccccc
tataccgtattgctgcgcggcgagaccggtacgggtaaggaggtggtggcgcgagcgatc
cattcggctgggcgacgcagcagcaaagcgttcgtggtgcaaaactgtgcggcgtttcct
gaagggctactcgagagtgaactgttcggctatcgcaaaggcgctttcaccggggctgat
cgcaaccacactgggctgtttgacgcggcgcacggtggcacgttgctcctggacgaaatc
ggcgatatgccacttgcgctgcaggccaagttgctgcgggttctgcaggaaggcgaagtc
cgcccgcttggggccagcaccgctcacaaggtcgatgtacgcatcatcgccgcaactcac
cgggacctcgcggcgatggtggccgaaggcagttttcgcgaggacctttactaccggttg
gcgcagtttcccatcgaactgccgcccttgcgtgagcgcgacggcgatgtgttgctattg
gcgcgcgaattttcgcagaaggcttgtgctgcacttgggcgggttccggtgggttggtcc
agcgcggcgttggatcaactctcaagtcacgccttccctggcaatgtccgcgagctcaaa
tgcctggtggagcgtgcagtactgctgtgtgatgagggtgtgatcctgccggcgcacctg
tccttgtctgcgccaccagccaatgagtcggtcgatgcaaccttgcgccaacggctggag
cgggtcgagcgggtattcctgatcgattgtctgcacaagaaccgtggcaatcgcacccgt
accgcacgcgagctaggcgttgcgcggcgcacgctgctttaccgtctggcgcgcctgaag
atccccgttggtgatgttcggggggagtgctga
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