KEGG   Pseudomonas sp. HN11: LVW35_23085
Entry
LVW35_23085       CDS       T11745                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pshn  Pseudomonas sp. HN11
Pathway
pshn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pshn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LVW35_23085
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pshn02022]
    LVW35_23085
Two-component system [BR:pshn02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LVW35_23085
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 Mg_chelatase FleQ AAA AAA_2 MCM FtsK_SpoIIIE AAA_3 uS17m_C
Other DBs
NCBI-ProteinID: UII70509
LinkDB
Position
5044903..5046237
AA seq 444 aa
MLNAVIVVDDEASIRTAVEQWLSLSGFEVQLFSRAEACLAQLPKDFPGVILSDVRMPGLS
GLELLAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLNSLRRALDK
RGLILENRRLHQQADHRAQLETTLLGVSRGLQTLRRQVLDLASLPVNVLIRGETGSGKEM
VARCLHDFGPRSKKPFVALNCAAIPEQLFEAELFGHESGAFTGAQGKRIGKLEYAHGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIHVDLRIIAATKPDLLEEARAGRFRED
LAYRLNIAQLRLPPLRERREDIPLLFDHFAQSAAERLGRSVEPLSGAQLGRLLSHDWPGN
VRELANVAERQVLGLGEPEPEGIEAGQSLAAQQEAFEAHCLKAALTRHKGDIKAVLAELQ
LPRRTFNEKMQRHGLARDMFLKDE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttgaacgcggtgattgtggtcgatgacgaagccagcatccgcacggccgtcgaacag
tggctgagcctgtcggggtttgaggtgcagctgttcagccgcgccgaggcatgcctggcg
caattgcccaaggatttccctggcgtaatcctgagcgatgtgcgcatgcccggactcagc
ggcctcgaactgctggccgaagtgcagcgccgcgatgccgatttaccggtcatcctgctc
accggccacggcgatgtgccgatggcggttgaggccatgcgcgacggtgcctacgatttc
ctggaaaaacccttcagccccgacgccctgctcaacagcctgcgccgtgccttggataaa
cgcggtctaatcttggaaaaccgccgtctgcaccagcaggccgatcatcgcgcacagttg
gaaacgaccctgttgggtgtgtcccggggtttgcagaccttacgccgccaggtcctggac
ttggcaagcctgccggtgaatgtgctgatccgtggcgagaccggcagcggtaaggaaatg
gttgcccgttgcctgcatgattttggcccgcgctcgaagaaaccctttgtagcgctcaac
tgcgccgcgatccctgagcagttgtttgaagccgagctgttcggccacgaaagcggcgcg
ttcaccggcgcccagggcaaacgcatcgggaagctggaatatgcccacggaggcacgctg
ttcctggatgaaatcgaaagcatgcccctggcccaacaggtgaaactgctgcgtgtgttg
caggagcagaaactggaacgcctgggctccaaccaaagtatccacgtagacctgcgcatc
atcgccgccaccaagccggacctgctggaagaggcccgcgccggacgctttcgtgaagac
ctggcttatcgcttgaacatcgcgcaattgcgcctgccccccttgcgtgaacgccgcgaa
gatatcccgctgctgttcgaccactttgcacagagcgctgccgagcgcctgggccgcagc
gtcgagcccctcagcggcgcgcaactggggcgcctgctcagtcatgattggccaggcaat
gtgcgtgaactggccaacgtcgccgaacgtcaggtactgggccttggcgagccggaaccg
gagggcatcgaggctgggcagtccctggcggcgcagcaggaagcattcgaagcccattgc
ttgaaagccgctttgacccggcacaaaggtgatatcaaggcggtgctggctgaactgcaa
ctgccacggcgcactttcaatgaaaagatgcagcgccatggcctcgcccgagacatgttc
ctgaaggatgaatga

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