Pseudomonas sp. HN11: LVW35_23335
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Entry
LVW35_23335 CDS
T11745
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pshn Pseudomonas sp. HN11
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshn03036
]
LVW35_23335 (xerD)
Chromosome and associated proteins [BR:
pshn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LVW35_23335 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
MrpR_C_cat
Motif
Other DBs
NCBI-ProteinID:
UII70555
LinkDB
All DBs
Position
complement(5101399..5102295)
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AA seq
298 aa
AA seq
DB search
MPAIDHLLIDRFLDALWLEKGLSVNTRQAYRSDLALFNGWLQEKRLELISAGRELILDHL
AWRLEQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQIDMPQLGRPLPKSLSESDVE
ALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWVERYMRNARSELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKA
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDMHAKHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgattgaccaccttctgattgaccgtttcctggatgctctctggctggaaaag
ggcctgtcggttaacacacgccaggcctatcgtagcgacctggccctgttcaatggctgg
ctgcaggaaaagcgcctcgagctcatcagcgccggccgtgagttgatcctcgatcacctg
gcctggcgccttgagcaaaactataagccgcgttcaactgcgagatttctctccggggtg
cgtggcttttatcgctatctgctgcgtgaaaagctgatagcggtcgacccgactctacaa
atcgacatgccacaattaggtaggcctcttcccaagtctttgtcagaaagtgacgtggag
gccttgctcgccgcccctgacctgagcgaagccatcggccagcgcgaccgcgccatgctg
gaggtcctgtacgcctgcggcctgcgggtcaccgagctgatcagcctgaccctggagcaa
gtcaacctgcgccagggtgtgttgcgggtgatgggcaagggcagcaaggagcggctggtg
cccatgggcgaagaggcgatcgtatgggtcgagcgctacatgcgtaatgctcgcagtgaa
ttgcttggcggacggcccagcgacgtactgttcccgagtttgcgcggcgagcagatgacc
cggcagaccttctggcatcgcatcaagcaccaggccaaggtcgccgggatcggcaaggcg
ctgtcgccgcacacactgcgccatgcatttgccacgcacttgctcaaccacggtgcggat
ttgcgtgtggtgcagatgctgctcggccacagcgacttatccaccacccagatctacacc
cacgtggcgcgcgcgcgtttgcaggatatgcacgccaagcaccacccgcgaggctga
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