Pseudomonas sp. HN11: LVW35_24475
Help
Entry
LVW35_24475 CDS
T11745
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
pshn Pseudomonas sp. HN11
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshn03009
]
LVW35_24475 (rlmE)
Enzymes [BR:
pshn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
LVW35_24475 (rlmE)
Ribosome biogenesis [BR:
pshn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LVW35_24475 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Cep192_D7
PCMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UII70765
LinkDB
All DBs
Position
complement(5342019..5342669)
Genome browser
AA seq
216 aa
AA seq
DB search
MARSKTSLKWLQEHFNDPYVKKAQKDGYRSRASYKLLEIQEKDKLIRPGMSVIDLGAAPG
GWSQVTSRLIGGQGRLIASDILEMDSIPDVTFVHGDFTEDAVLGQILEAVGNSQVDLVIS
DMAPNMSGLPAVDMPRAMFLCELALDLAGRVLRPGGDFLVKVFQGEGFDEYHKNIRKLFD
KVQTRKPDSSRDRSREQYLLCRGFRGVEGATSEERF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgttccaaaaccagccttaagtggcttcaagaacatttcaacgatccttacgtc
aaaaaggcgcaaaaggacggctaccgttcccgggccagctacaagctgttggagattcag
gaaaaggataaattaatccgtccgggaatgagcgttattgatctgggggcagcccctggt
gggtggtctcaggtgaccagtcgtctgattggtgggcagggccgcttaatcgcttccgac
attctggaaatggacagtatcccggatgtgacctttgttcatggggacttcaccgaggac
gcggtgctcggacaaatccttgaagctgtgggaaattcgcaggtagaccttgtgatttcc
gacatggcccccaatatgagtggattgccggccgttgatatgccgcgcgcgatgttcctt
tgtgaactggcgctggatttggcgggtcgagttctgcgccctggtggtgattttctggtg
aaagtcttccagggcgagggttttgacgagtaccacaagaatatccggaaattgttcgac
aaggtgcagacgcgtaagcctgattcctcccgggacaggtctcgggagcagtacttgctg
tgccgcggtttccgcggtgttgaaggcgctacgagtgaagagcgtttttga
DBGET
integrated database retrieval system
