Pseudomonas sp. HN11: LVW35_25120
Help
Entry
LVW35_25120 CDS
T11745
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pshn Pseudomonas sp. HN11
Pathway
pshn03030
DNA replication
pshn03430
Mismatch repair
pshn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVW35_25120 (holA)
03430 Mismatch repair
LVW35_25120 (holA)
03440 Homologous recombination
LVW35_25120 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshn03032
]
LVW35_25120 (holA)
03400 DNA repair and recombination proteins [BR:
pshn03400
]
LVW35_25120 (holA)
Enzymes [BR:
pshn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVW35_25120 (holA)
DNA replication proteins [BR:
pshn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVW35_25120 (holA)
DNA repair and recombination proteins [BR:
pshn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVW35_25120 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UII70887
LinkDB
All DBs
Position
5492354..5493391
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGGLEPVYIVSGDDPLLCQEAADAIRTAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGAQTQFIQIWPVDSNQLPQWIRQRLSQSGLSATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE
GVEPPVILWALARELRVLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcgccaaacacctgcaaggtggccttgagcctgtctat
atcgtcagcggcgatgatccgctgctgtgccaggaagccgccgacgccatccgcacggct
gcacgccagcaaggcttcgacgagcgtcaggtcttcagcgccgacgccagtttcgactgg
ggcacgctgctgcaagctggcgcgagcatgtcgctgtttgccgaaaaacgcctgctggag
ctgcgcttgccttcgggcaagccgggcgacaaaggcgcggcagccttaatggaatactgc
tcgcggcctgctgaagacacagtgctgttgatcagcctgcccaagctcgacggcagtgcg
cagaaaaccaaatggggcaaggccctggtggaaggggcgcaaacccagttcatccagatc
tggccagtggacagcaatcagttaccgcagtggattcgtcagcgcctgtcccaatcgggg
ctgtcggcgacccaggacgccgtggagctgattgccgctcgggtcgaaggcaacttgctg
gccgccgcccaggagatcgaaaagctcaagctgatggccgaagacgggcagattaccgtc
gagaccgtccaaggcgccgtggcggatagcgcgcgttttgatgtgttcggtttggtggac
gcaattctcaatggcgagcccgctcacgccctgcgcatgctcgaaggcctgcgcggcgaa
ggtgtagagcccccggtgattctctgggccctggcccgggaactgcgcgtgctggccaat
atcgccctgcaatacagccagggtacgccgctggacaaggccttcagccaagcccgtccg
ccggtatgggacaagcgcaaacccctgatgagcaaagcgctgcagcggcactcggcgcaa
cgctgggcgcaactgttgctggaagcgcagcgtatcgacgcgcagatcaagggccaggcg
gccggttcaccgtggatgagcctgagccgtttgtcgctgttaatggccggccagcgcctg
accctccccgctgaataa
DBGET
integrated database retrieval system
