Pseudomonas sp. HN11: LVW35_25365
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Entry
LVW35_25365 CDS
T11745
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pshn Pseudomonas sp. HN11
Pathway
pshn00900
Terpenoid backbone biosynthesis
pshn01100
Metabolic pathways
pshn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LVW35_25365 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pshn01006
]
LVW35_25365 (ispA)
Enzymes [BR:
pshn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LVW35_25365 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LVW35_25365 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LVW35_25365 (ispA)
Prenyltransferases [BR:
pshn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LVW35_25365 (ispA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UII70932
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All DBs
Position
5540593..5541480
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AA seq
295 aa
AA seq
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MIDAYQASSQARVNAALEPLFVAPSPELKRLYEAMRYSVMNGGKRVRPLLAYAACEALGA
PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPKLSSVNAEIRLRMVTALAVAAGPAGMVGGQAIDLGSVGQKLDQHALEYMHRHK
TGALIEAAVHLGALASGRAEAAQLAALKTYALAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLEAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcgtatcaggccagtagccaagctcgggtcaatgcggcgttggaacccttg
tttgttgcgccaagccccgaactcaagcgtctttacgaagccatgcgctacagcgtgatg
aacggcggcaagcgcgtgcgtccgttgctggcgtatgcggcgtgtgaagccttgggcgcg
ccggccgagcaagcgaatggtgcggcctgtgcggtggagctgattcacgcttattccctg
gtgcatgacgacttgccggcgatggacgatgacgatttgcgtcgcggccagcccaccacc
cacaaagcctttgatgaagcctgtgcgatcctcgccggtgacggcctgcaaagcctggcg
ttcagcgcactgctggacccaaagctgagcagcgtgaatgccgagatccgtttgcgcatg
gtcacggcgctggccgtggcggcgggcccggccggcatggtcggcggccaggccatcgac
ttgggttcggtcggccagaagctcgaccagcacgccctggaatacatgcaccgccacaag
accggcgccttgatcgaagctgccgtgcacctgggcgcgctggccagtgggcgtgccgag
gccgcacaattggcggcgctgaagacctacgcactggccatcggcctggcattccaggtg
caggacgacattctcgacgtagaaagtgacacggccaccctgggcaaacgccaaggcgcc
gatattgcacgggacaaaccgacatatcccgcgctgctcgggctggaagccgccaaggcc
tatgccctggagctgcgtgaccaagccctggccgccctgcgacctttcgacgcggcggcc
gagccactgcgtgacctggcgcggtatatcgtcgaacgccggcactga
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