Pseudomonas sp. HN11: LVW35_28270
Help
Entry
LVW35_28270 CDS
T11745
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pshn Pseudomonas sp. HN11
Pathway
pshn02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LVW35_28270 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshn02044
]
LVW35_28270 (tssK)
Secretion system [BR:
pshn02044
]
Type VI secretion system
Imp/Vas secretion system core components
LVW35_28270 (tssK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
UII71475
LinkDB
All DBs
Position
complement(6134648..6135982)
Genome browser
AA seq
444 aa
AA seq
DB search
MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVEEGEALE
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFSP
VMAALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDNASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWQQLSN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctggaaaacttgattgatgcccgcagccgccccttgtctgcc
ggggcttggggcttttccgaattgctgatcgaccagggcctgctggcccagggcaagctg
gcgatcgtgtcggcgcgtggcctgctgcccgacggcacgccgttcaatatcccccaggat
gacctggcgccaagcccgttgaacatcgatgacaacctgcgcgacggcctggtgtacctg
gccctgccgctcaagcgtgccggcgcccgcgataccgtggaggaaggcgaagccctggaa
gccgcgcggtatgtgagccaggtacgcgaagtgcgtgatgacaacgcgccgttcgaaaac
cgcgccccggtggccgtcggctcccgcgccctgcgcttgctcaccgcccaggatggcatc
agcgactacgctgccattggcctggtacgcatcaaggaaaaacgcgccgaccgcgcgctg
gtactcgacgacacctacatcccacccgtgctggacgtggctgcaagcaagccgctgact
gcatttcgcagcgagctactcggcctgctgcaccagcgcggcgaagccctggcggggcgc
gtggtggcctcgggcgccggtggcgcgtcggagattgccgacttcatgctgctgcaactg
gtcaaccgagcgcagccactgatccagcatttgagccagttgagcccgctgcatccggag
cgcttcttcagtgaactggtcagcctggccggtgagttctcgaccttctcgacctcgggc
cgtcgcccccaggaatacccgcagtaccagcacgacgacctggccctgagcttttccccg
gtgatggcggcgttgcgcgaagcgctgtcgatgctgatcgacagcaaggccacgccgatc
ccgattgtcgagaaagcctacggcgtccacgtggcgatgctggccgacaagaccctgctc
gacaacgccagcttcattctggtggtgcgtgccgatgtccccggcgaaaccctgcgtgcg
cgcttcggccagcagagcaaagtcggttcggtggagcacatccgcgacctagtcaacctg
caactgccggggattggcctgttgcctctgccggtggcgccacgccaactgccgtaccac
gccggctcgacgtattacgagctcgatcgcggcagcgagcattggcaacaactgagcaat
tccggtggtttcgccttccatatcgccgggcagttcccgggcttgaacctggccttctgg
gcgatccgaggataa
DBGET
integrated database retrieval system
