Pseudoalteromonas shioyasakiensis: KQ246_02025
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Entry
KQ246_02025 CDS
T08873
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho02020
Two-component system
psho02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KQ246_02025
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KQ246_02025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psho02022
]
KQ246_02025
02035 Bacterial motility proteins [BR:
psho02035
]
KQ246_02025
Two-component system [BR:
psho02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
KQ246_02025
Bacterial motility proteins [BR:
psho02035
]
Flagellar system
Flagellar assembly proteins
Others
KQ246_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
AAA
FleQ
AAA_16
DUF2089
MerR
MFD_D3
HTH_20
DUF4411
Sigma70_r4_2
HTH_24
AAA_3
HTH_5
AAA_7
AAA_19
MCM
AAA_22
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QWV05364
LinkDB
All DBs
Position
422276..423679
Genome browser
AA seq
467 aa
AA seq
DB search
MNTNSILVVEDDAGLREALIDTLEMSGIDCVAADSAEQAMILLKQNSYSLVVSDVQMGAM
SGLDLLRSIKLNYPELPVLMMTAYATIDDAVEAMRLGAIDYMAKPFAPEVLLNMVSRYLP
EKEKETDGPIVADPSSIKLLELASKVARSDASVMVLGPSGSGKEVLARFIHDKSNRSDAP
FVAINCAAIPENMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEITEMDLGLQAK
LLRVLQEREVERLGGRKTIELDVRVLATSNRDLKEAVSENLFREDLYYRLNVFPLMWKPL
AERPGDIIVLAEHLIERHCLKSKDPIAQLSESAKQKLLSHAWPGNVRELDNVIQRALILC
DGNSIHQDDVFIEELLSADIKPVATPSHNAPAYQEQPVEVNLDTVPQVSEQGNYKDELKD
KEHRIILETLARCNGKRKEVAETLGISPRTLRYKLAQMRDLGIALPA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaatactaactctattttagtcgttgaagacgacgcaggcttacgagaagcgctaatc
gatacccttgaaatgtcgggtattgattgcgttgctgcagatagcgctgaacaagcgatg
atcttgcttaagcaaaatagctattcattggttgttagcgacgtgcaaatgggcgctatg
agcggccttgacctactacgtagcattaaacttaattatcctgagctgccggtattaatg
atgacggcctatgccaccattgatgatgctgtagaagcaatgcgtctaggcgcgattgat
tacatggcaaaaccgtttgccccagaagtgcttcttaacatggtgagccgttatttgcct
gaaaaggaaaaagaaactgatggcccaattgttgccgatccatcgagcattaaactatta
gaacttgcgagtaaagttgcgcgctctgatgccagtgttatggtactcggcccaagtggc
tcgggtaaagaagtgttggctcgttttatccacgacaaatcaaatcgtagcgatgccccc
tttgttgctattaactgcgcggctattccggaaaatatgcttgaagcaaccttatttggt
tacgaaaaaggggcgtttaccggcgctattcaagcctgtcctggtaaatttgagcaagct
caaggtggtaccatcttacttgatgaaattactgagatggatttaggcttacaagctaaa
ttactgcgtgtacttcaagagcgcgaagtagagcgcttaggcggacgtaaaactattgaa
cttgatgttcgcgtactcgccacaagtaaccgagatttaaaagaagcggtgagcgaaaat
ctatttagagaagatttatattatcgcttaaatgtgttcccgctaatgtggaaaccacta
gctgagcgtcctggcgatattattgtattggctgagcatttgatagagcgtcattgcctt
aaaagtaaagatcctatcgctcaactaagtgagagtgcgaaacaaaagctgctatcgcat
gcttggccaggtaacgtacgagagcttgataacgttattcaacgggcgttgatattatgt
gatggtaatagtattcatcaagacgatgtttttattgaagagttgttatctgcggatatc
aagccagtcgctacgccatcacacaatgcaccggcttatcaagagcagcctgtagaggtt
aatttagataccgtgccacaagtaagcgagcaaggtaattacaaagacgagctgaaagat
aaagagcatcgtattattttagaaaccttagcgcgctgtaatggtaagcgtaaagaggtt
gcagaaaccttaggtattagtccacgcactttacgttataaactggcgcaaatgcgagac
ttaggtatagccttacctgcatag
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