Pseudoalteromonas shioyasakiensis: KQ246_02630
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Entry
KQ246_02630 CDS
T08873
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psho03016
]
KQ246_02630 (truA)
Enzymes [BR:
psho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KQ246_02630 (truA)
Transfer RNA biogenesis [BR:
psho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KQ246_02630 (truA)
Prokaryotic type
KQ246_02630 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Mucin2_WxxW
Motif
Other DBs
NCBI-ProteinID:
QWV05467
LinkDB
All DBs
Position
550800..551594
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AA seq
264 aa
AA seq
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MRVALGVEYNGARYSGWQRQSHVNSVQQEVETALSRICNHPVEIVCAGRTDAGVHGTGQV
IHFDTHAEREMVAFTMGMNTLLPKDIAIRFAQPVSEDFHARFSATARRYRYVIYNYTYRG
AIMSEGVTHFHHPLDETKMQEACQYLIGEHDFTSFRALHCQANTANRTIHHLSVKRQGDY
VIIDIKANAFLHHMVRNITGCLMDIGLHKHEPVWLKELLDLKERAKASATAKAAGLYLVD
VDYPEHFGIPKTPLGPLFLPDSDS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcacttggagtagaatacaacggcgcgcgttacagtggttggcaacgtcaa
tcacacgtcaatagcgtacaacaagaagtagaaacggcgttgtcgcgtatttgtaatcat
ccagtcgaaattgtttgtgcaggccgcaccgatgcgggtgtacatggcaccgggcaagtg
atccattttgatactcacgctgagcgtgaaatggtcgcgttcactatgggtatgaatacc
ttactgccaaaagatattgctattcgctttgcccagcctgtaagcgaagactttcacgct
cgttttagtgctacagctcgtcgctaccgctatgtgatttataattacacctatcgcggc
gctatcatgagtgaaggggtgacacactttcatcacccattagacgaaactaaaatgcaa
gaagcctgtcagtatttaataggcgagcatgactttacttcgtttagagcactacattgc
caagcaaatacagcaaatcgtactattcaccacctgtcggtaaaacgccaaggtgattat
gtgattattgatattaaagccaatgcgtttttacatcacatggtacgaaacatcacaggg
tgtttgatggacattggtcttcataagcatgaacccgtgtggttaaaagaattactcgat
ttaaaagagcgcgctaaggcaagtgcgacagcgaaagctgctggcctttacttagttgac
gtggattacccagaacattttggcattcctaaaacaccattagggcctttgtttttacct
gattcagacagttag
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