Pseudoalteromonas shioyasakiensis: KQ246_03005
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Entry
KQ246_03005 CDS
T08873
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psho03110
]
KQ246_03005 (clpB)
Chaperones and folding catalysts [BR:
psho03110
]
Heat shock proteins
HSP100
KQ246_03005 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
IstB_IS21
nSTAND3
AAA_24
TniB
RuvB_N
ATPase_2
AAA_18
bpMoxR
AAA_7
NBD_SMAX1
Zeta_toxin
NACHT
DNA_pol3_delta2
KIP1
Motif
Other DBs
NCBI-ProteinID:
QWV05528
LinkDB
All DBs
Position
652091..654667
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AA seq
858 aa
AA seq
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MRLDRFTSKFQSALSDAQSLALGRDHQFIEPVHLMYSLLQQNGSSVRALLAQTGVSADEL
NTKLSQEIEKLFKVEGIGGDVQLSNNLISLINLCDKYAQKRKDKFISSELFVLAACDDKG
PLGDIFKALNITSSKIEAAIEAIRGGQKVDDPNAEETRQALKKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSL
DLGALVAGAKYRGEFEERLKSVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYELH
HSVDITDPAIVAAAQLSHRYISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRII
QLKLEDNALAKEKDEASQKRRTEMQELITELEAQYRELDEVWNAEKASLQGTQVIKAELE
QARLDLDVARRASDLQRMSELQYGRIPELERKLDLASQAEMQEMSLLKNQVGEDEIAEIL
SRWTGIPVSKMLQGEREKLLKMEDELHHKVIGQDEAVVAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELTKALASFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDIIQEQAGSNDYAGLKEKVMGVLVSQFRPEFINRIDETVVFHPLANEHIKEIADIQLS
KLRERLTEKGYILEVTDAALDRIAESGFDPVYGARPLKRAIQHTIENPLAQRLLGGDYQP
GAIIHIDADENGLVFSSR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagatagatttacaagtaaatttcaatctgcgctttcagatgcgcagtcatta
gcacttgggcgagatcatcaatttattgagcctgtgcatttaatgtattcattgcttcaa
caaaatggctcgagtgtgcgtgcgctacttgcacaaaccggtgtgagtgctgatgagtta
aacaccaagttatctcaagaaatcgaaaaactgtttaaagttgaaggcattggtggcgat
gttcagctgtcaaacaacctgatttcgttaattaacttgtgtgataaatatgctcaaaag
cgaaaagataaattcatttcgagtgagttatttgttcttgccgcgtgtgacgataaaggc
ccattaggcgacatttttaaagcgctaaatattacttctagcaaaattgaagcagcaatc
gaagctattcgtggtggtcaaaaggttgatgatccgaatgctgaagaaacccgtcaggca
ttaaaaaaattcacaatcgatttaactgagcgagcagagcaaggcaagctagaccctgta
attggccgggatgacgaaattcgtcgtactattcaagtattacaacgccgtactaaaaat
aatccggtgttaattggtgaaccaggcgtgggtaaaacggcgattgccgaaggtttagca
cagcggatcatcaatggagaggtacctgaaggcttaaagaataagcgagtattatcgctt
gatttaggtgctttagttgctggtgctaaataccgtggtgaattcgaagagcgtttaaag
tcagtgttgaatgaactagccaaagaagaagggcaagtcatcctctttattgatgaaatc
catactatggtaggcgcaggtaaaacagacggcgcaatggatgcaggtaatatgctaaaa
ccagcacttgcccgtggtgagttacattgtgtgggtgccacaactcttgatgagtatcgt
caatatattgaaaaagatgccgctttagagcgtcgtttccaaaaagtatttgttgatgaa
ccatcggttgaagacaccattgcgattttacgtggtttaaaagagcgttatgagcttcat
cactcagttgatattaccgatccggccattgttgctgcggcgcagctgtcgcaccgttac
attagtgatcgccaattgccagataaagcgattgatttaattgacgaagcgggctcttca
attcgtttgcaaattgactcaaaaccggaatctttagataagctagagcgtcgtattatt
cagttaaagctggaagataacgcccttgcaaaagagaaagacgaagcgagccaaaaacgt
cgtactgagatgcaagagttgatcactgagcttgaagcccaataccgcgaactagacgaa
gtttggaatgctgagaaggcttcattacagggcacacaagtcattaaagctgagcttgag
caagcgcgtcttgatttagatgttgcgcgtcgtgcaagtgatttacagcgcatgtctgaa
cttcagtatggtcgtattcctgaacttgagcgtaaacttgaccttgcttcacaggccgaa
atgcaagaaatgagcttgcttaaaaaccaagttggtgaagacgaaatcgcagagatttta
tcgcgttggacaggtattcctgtatccaaaatgttgcaaggggagcgcgaaaagctactt
aagatggaagatgaactgcatcataaagtgattggtcaagatgaagccgttgtagcggtt
gcgaatgcaattcgtcgctctcgagcagggcttgctgatccaaatcgcccaatcggttca
ttcttattcttaggcccgacaggggtgggtaaaactgagctgaccaaagcactagccagc
ttcatgtttgacactgaagatgccatggtgcgcattgatatgtcggagtttatggagaaa
cactcggtggcacgtttagtgggtgcacctccgggttatgttggctatgaagaggggggt
tatttaactgaagcagttcgccgtcgtccgtattcagtcattttattggatgaggtcgaa
aaagcgcaccctgatgtatttaacatcttactgcaagtacttgatgatggccgcttaacg
gatggtcagggccgtaccgttgatttcaaaaatacggttatcattatgacttctaactta
ggctctgacattatccaagagcaagctggttcaaatgattatgcaggcttaaaagaaaaa
gtgatgggcgtattggttagtcagttccgtcctgagtttattaaccgaatcgacgaaacc
gtggtattccatccacttgctaatgaacacattaaagaaattgctgacattcagttaagt
aagctacgtgagcgattaactgaaaaaggctacattcttgaagtaacggatgcagcccta
gaccgcatcgctgaaagtggttttgatccagtgtatggggcaaggcctttaaaacgtgct
atacaacataccattgaaaatccattagcacagcgattattaggtggggattatcagccg
ggtgccatcatccatattgatgctgatgagaatggacttgttttctcgagtcgttaa
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