Pseudoalteromonas shioyasakiensis: KQ246_04180
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Entry
KQ246_04180 CDS
T08873
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho00300
Lysine biosynthesis
psho01100
Metabolic pathways
psho01120
Microbial metabolism in diverse environments
psho01230
Biosynthesis of amino acids
Module
psho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KQ246_04180 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psho01002
]
KQ246_04180 (dapE)
Enzymes [BR:
psho01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KQ246_04180 (dapE)
Peptidases and inhibitors [BR:
psho01002
]
Metallo peptidases
Family M20
KQ246_04180 (dapE)
BRITE hierarchy
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QWV05695
LinkDB
All DBs
Position
complement(901100..902230)
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AA seq
376 aa
AA seq
DB search
MTHPVIELAQALIQRESVTPEDAGCQALMNERLEKLGFNIESLFFTDTLNTWARKGNASP
HFCFAGHTDVVPTGPEKNWQHPPFSARVKEGMLHGRGAADMKGSLAAMVVATERFVAKHP
DHNGSISFLITSDEEGPFINGTTRVIDTLEARGEKIDLCLVGEPSSRDELGDVVKNGRRG
SLTGFLTIKGVQGHVAYPHLAQNPIHLAAPALTELSQTEWDQGNEFFPATSFQVSSINGG
TGAGNVIPGELEIQFNFRFSTEVTHQQLQQRVVDIVEKHNLNYELNWIVNGLPFLTDHGP
LVDATVHAIKQVTGRETALETTGGTSDGRFIAQTGAKVIELGPRNETIHKVNECVSTEDL
IQLADIYEIILEQLLT
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgactcaccctgttattgaacttgctcaagcacttatccagcgtgaatcagtaacgcct
gaagatgccggttgccaagcgttaatgaacgaacgtttggaaaagctagggtttaatata
gaatcactgtttttcactgataccttaaatacttgggctcgtaagggaaatgcgtcaccg
catttttgttttgcgggtcacaccgatgttgtaccaactggtcccgagaaaaattggcag
cacccgcccttttcggcacgagtaaaagaaggcatgttacatggtcgcggtgcagccgat
atgaaaggttctttagctgcaatggtggttgccaccgagcgttttgtggctaagcaccca
gatcataatggatctatttcgtttttaattacttcagatgaagaaggcccgttcatcaac
ggcacaacccgtgttatcgatacccttgaagcgcgtggtgagaagattgatttatgctta
gtcggcgagccatcatcacgggatgaacttggcgatgtggtaaaaaatggtcgacgtggc
tcattaactggctttttaaccattaaaggtgtgcaaggccatgttgcttatccgcatctt
gctcaaaatccgattcacttagccgcccctgcgttaactgagctaagtcaaaccgagtgg
gatcaaggtaacgaatttttccctgcaacgagctttcaggtttcgagtattaacggtggc
accggtgccggaaatgtgatcccaggtgaacttgagattcaatttaacttccgctttagc
acagaagttacacaccagcagctacaacaacgagtcgttgatattgttgaaaaacacaat
ctgaattatgagttaaattggattgtaaatggactgccgtttttaaccgaccacggcccg
ttagttgatgcaactgtgcatgctattaagcaggtgactggacgcgaaacagcgcttgaa
acgactggtgggacatctgatggtcgttttatcgcacaaacaggtgctaaagtcattgaa
cttggcccgcgtaatgaaaccattcataaagtaaacgaatgtgttagcacagaggattta
attcaacttgctgatatctacgaaatcattttagagcaactgcttacatga
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