Pseudoalteromonas shioyasakiensis: KQ246_05845
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Entry
KQ246_05845 CDS
T08873
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho03030
DNA replication
psho03430
Mismatch repair
psho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ246_05845
03430 Mismatch repair
KQ246_05845
03440 Homologous recombination
KQ246_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psho03032
]
KQ246_05845
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_05845
Enzymes [BR:
psho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ246_05845
DNA replication proteins [BR:
psho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQ246_05845
DNA repair and recombination proteins [BR:
psho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQ246_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Ant-IIb_sub-bd
Motif
Other DBs
NCBI-ProteinID:
QWV05961
LinkDB
All DBs
Position
complement(1253220..1253927)
Genome browser
AA seq
235 aa
AA seq
DB search
MAKQGAKLDWPTRYQQLLAASKQPLIQEFYESAICDLKMPISDVPLVALDFETTGLNFQN
DDIVSVGLIPFNTKRIFCKDSQHWVVQPRRKLAEESIVIHGITHSEVSDAPDFSTIMEPL
ITALKGKVIVVHFAPIERHFLYQALQARLGEGLEFAVIDTLDLETRALRAKQGLLGRLFN
SKLDSVRLADSRIRYSLPAYQNHNALNDATATAELLQAQIAYHYRQDTPLSEFLI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaggggcaaaacttgattggccgactcggtatcagcagttattagctgcg
agtaaacagccgttaattcaagagttttatgaatctgccatttgtgacctaaagatgcca
atcagtgacgttcccttagtggcgcttgattttgagacaacaggtctaaattttcaaaat
gacgatatagtcagtgtcggcttaatcccatttaatactaagcgtatcttttgtaaagat
agccagcattgggttgttcagccaaggcgtaagctcgctgaagagtcgattgttattcat
ggcataacccattcagaagtaagcgatgcgccagatttctcaacaattatggaaccatta
ataacagcattgaagggcaaagtgattgtggtgcattttgcacccattgaaaggcatttt
ttatatcaagcgttgcaagcacgcctaggcgaaggacttgaatttgccgttatagacacg
ctagatctggaaactcgtgctctgcgagcaaagcaggggttactaggtcgattattcaac
tctaagcttgattctgtgcgattagctgattctcgtattcgttattcgctgcccgcgtat
caaaaccacaatgcgctgaatgatgccactgctaccgcagagctattacaagcgcaaatc
gcatatcattaccgccaagatacgccgctaagcgaatttcttatataa
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