Pseudoalteromonas shioyasakiensis: KQ246_05935
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Entry
KQ246_05935 CDS
T08873
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psho03032
]
KQ246_05935 (gyrA)
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_05935 (gyrA)
Enzymes [BR:
psho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KQ246_05935 (gyrA)
DNA replication proteins [BR:
psho03032
]
Prokaryotic type
DNA Topoisomerases
KQ246_05935 (gyrA)
DNA repair and recombination proteins [BR:
psho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQ246_05935 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QWV05976
LinkDB
All DBs
Position
complement(1275928..1278624)
Genome browser
AA seq
898 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLALIQNPDMSIADLIEYIPGPDFPTAAIINGKKGIEQAYLTGRGKV
YIRARAEIEVDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALDNNQPKCFNLKEMLEAFIVHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARPWELGTV
KAMLEKAGEDNVARPDWLAADLGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILDEYQ
NLLDLIAELLHILSSPDRLMEVIRDELVEIKEQYGDERRTEISAAAHDISLEDLINEEDV
VVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVREYEEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEAEESEVVDENG
NPVLDENGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKSDGAILTVTENGYGK
RTALEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDENDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVDELEAIEGEAVEVVDTNTEETGDNPPSE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagatgaattaaaaaattct
taccttgattatgccatgagtgtaatcgtaggtcgtgcattgccagacgtacgtgacggc
ttaaagcctgttcaccgccgcgttttgttcgcaatgaacgaactcaataatgattggaat
aaaccttacaagaaatcagcacgtgttgttggtgatgtaatcggtaagtaccacccacat
ggcgacagcgcggtatatgacaccatcgttcgtatggcgcagcctttctcattacgctac
atgcttgttgacggccaaggtaactttggttctgttgacggtgactctgcggcagcaatg
cgttatacggaagtccgtatggcgaaaatgtcacatgaattattagctgatttagaaaaa
gaaacggttgattacgtaccgaactacgacggtactgagcaaattcctgacgtattacct
actaaagtacctaacttattagtaaacggttcttcgggtatcgctgttggtatggcgact
aacattccacctcataacttaacagaagttatcaatggttgtttagcgctaatccaaaac
ccagacatgtcaattgctgaccttattgaatatatcccgggtccggatttcccgactgcg
gcgattatcaatggtaaaaaaggcattgagcaggcgtatttaacgggtcgtggtaaagta
tacatccgtgctcgcgctgaaatcgaagttgacgaaaaaaccggtcgtgaaacaattatt
gttcacgaaattccttatcaagttaacaaagcgcgccttatcgaaaaaatcgctgagcta
gttaaagataagaaaattgaaggtataagcgcactacgtgacgaatcagataaagacggt
atgcgtatcgttatcgaaatcaaacgtggtgatgttggtgaagtaatcttaaacaaccta
tatgcacaaactcagttacaaactgtgtttggtatgaacatggttgcacttgataacaac
caacctaagtgtttcaacttaaaagaaatgcttgaagcgtttatcgttcaccgccgtgaa
gttgttacacgtcgtactgtattcgatttacgtaaagcccgtgaccgtgctcacacgctt
gaaggcttagcgattgctcttgcgaatatcgacccgattatcgaacttattcgtaagtca
ccaaccccagcagaagcaaaagcagcattaacagctcgtccttgggaacttggtacagtt
aaagctatgcttgaaaaggcaggtgaagataacgtagcacgtcctgactggttagcggct
gatttaggtatccgtgacggtcagtactatttatctgagcaacaagcacaagcaatttta
gaccttcgtttacacaaactaacaggtcttgaacatgagaaaatcttagacgagtaccaa
aacttacttgatctaattgctgagcttttacacattctttcaagcccagatcgtttaatg
gaagttatccgcgacgagctagtagaaattaaagagcaatatggtgacgaacgtcgtact
gaaatcagtgcagctgctcacgatattagccttgaagacctaatcaatgaagaagacgtt
gttgtaacgctttctcacgaaggttacgttaagtatcaaccactctctgattacgaagca
cagcgtcgtggtggtaaaggtaagtcagcaactaagatgaaagatgaagacttcatcgag
cgtctattggttgctaacacacacgatacaattctgtgtttctcaacggcaggtcgctta
tattggttgaaagtttatcagttaccattagcaagccgtgcagcgcgtggtaagccaatt
gttaacttattaccacttgaagctgatgagcgtattaccgctatcttaccagtacgtgag
tacgaagaagataaatacatctttatggcaacagcgtttggtacagttaagaaaacacca
cttaccgcatacagccgtcaacgtgcgagcggtattatcgctgttaacctgaatgaaggt
gatagcctaattggtgttgatatcactgatggcacgaatgaaatcatgctattcactgat
gccggtaaagttgtccgctttaaagaagcagaagagtcagaagttgttgatgaaaacggc
aaccctgtgctagacgaaaacggtaacccggaaatccgcttcaaaggtgttcgtccgatg
ggccgtacagcaacgggtgttcgtggtattaagatggctgacgaccaacgcgttgtgtcg
ttaatcgtacctaagtcagatggtgcgatcctaactgtgacagaaaacggttacggtaag
cgtacagcacttgaagattacccatcgaagagccgtgcaacacaaggtgttgtatcaatc
aaagtaagcgagcgtaatggcgctgtggttggtgcagtacaagttgacgaaaacgacgaa
atcatgatcatctctaatcgcggtacattagtacgtacccgtgttaatgaggtttctacg
gttggtcgtaatactcaaggcgttattttgatacgaactattgacgaagagcaagtagtt
ggtttacaacgtatcgaagaaatcgaagttgatgagcttgaagccatcgaaggcgaggcc
gttgaagtagtcgataccaatactgaagaaacgggtgataacccaccttcagaataa
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