Pseudoalteromonas shioyasakiensis: KQ246_06055
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Entry
KQ246_06055 CDS
T08873
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho00541
Biosynthesis of various nucleotide sugars
psho01100
Metabolic pathways
psho01250
Biosynthesis of nucleotide sugars
Module
psho_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KQ246_06055 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psho01005
]
KQ246_06055 (kdsB)
Enzymes [BR:
psho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
KQ246_06055 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
psho01005
]
Lipid A
KQ246_06055 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Terminase_7
DUF2064
ComJ
MVD-like_N
NTP_transferase
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
QWV05995
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Position
complement(1306836..1307591)
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AA seq
251 aa
AA seq
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MEFVVVIPARYASTRLPGKPLADICGKPMIQHVYEKAVASGASKVYIATDHQIVFDAVKE
FTSNVLMTREDHQSGTERLAEVVEQLELESDTIVVNVQGDEPLLASENVSQVAKLLADSD
APMATLSTSIDEIEDIFNPNCVKVISDVDNNALYFSRSPIPYHRDAMMKNDHSQLNLADF
ARHIGLYAYRAGFIKDYIELPQTRLELLESLEQLRVLYHGHKIKIAKAKCAPQAGVDTPE
DLARVIAVLGN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcgtagtcgtcattccagcacgctacgcatcgacgcgtttacctggtaaacca
cttgctgatatatgtggcaagcctatgatccaacacgtttatgaaaaagcggttgcttcc
ggtgcatcaaaagtctatatcgcgactgaccatcaaatagtgtttgatgcagttaaagag
tttaccagtaatgtactgatgacacgtgaagatcaccaatcgggcactgagcgtttagct
gaggtcgttgagcaattagagctagagagtgacaccattgtagtgaacgtacaaggtgat
gagcctttattagcaagtgaaaacgtatctcaagttgctaagcttcttgctgattcggat
gcacctatggctacattaagtacaagtatcgatgagattgaagatatttttaatcctaat
tgtgtaaaagtcattagcgatgtggataacaacgcgctgtatttttctcgatcgccaatt
ccctatcaccgtgatgcgatgatgaaaaatgatcactctcaattaaatttagctgatttt
gctcgtcacattggtctttatgcctatcgcgcaggcttcatcaaagattatattgagttg
ccgcaaacgcgtttagagcttctagagtctttagaacagttacgtgtactttaccatggt
cacaagattaaaatcgctaaggcaaaatgcgctccacaagcaggcgttgatacccctgaa
gatttggctcgcgtcatagctgtgcttggcaattaa
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