Pseudoalteromonas shioyasakiensis: KQ246_06750
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Entry
KQ246_06750 CDS
T08873
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psho01002
]
KQ246_06750
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
KQ246_06750
Peptidases and inhibitors [BR:
psho01002
]
Cysteine peptidases
Family C82
KQ246_06750
Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KQ246_06750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QWV06106
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All DBs
Position
1469625..1470623
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AA seq
332 aa
AA seq
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MQNNILKPGQSDAAVPLLRQKLKRLNYFQGSGNDDTDYDNELVAAVKNFQSAHQVTDDGV
IGNATLKLLNKDYSEYIDDILVNLERIRWVDNTLTERFLVVNIAGFKLFLFEDNKLKWQT
NVVVGRNYTKTPIFKGQMSYIVMNPTWTVPRSISGGIIKKMKENPNYLNEKDFVVVDSRR
NPVDSKSIDWANASRKNFPYWFVQQPSENNSLGQIKFMFPNKYSIYLHDTPAKTLFQQDQ
RAFSHGCVRVDDPFTLAEKILETSDNWSRSDIDDAIAAKETTKISLSKPLDVLLMYWTVA
GDDESLQFYTDVYNRDGALLKALTTPLANNTI
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacaatatattaaaaccgggtcaatcagacgcagcagtaccgctgttaagacaa
aagttaaagcgcttaaattattttcaaggcagtggtaatgatgatactgattatgacaac
gagctagttgcagcagttaagaattttcagagtgctcatcaagttactgacgacggtgtg
attggtaacgcaacgttaaaattactcaacaaagattacagtgaatacattgatgatatt
ttagtaaacctagagcgtattcgttgggttgataatactctcacagagcgcttcttagtg
gtaaatatcgctggttttaaactatttttatttgaagacaacaaattaaaatggcaaacc
aatgtggtcgttggcagaaactacaccaaaaccccaatatttaaagggcaaatgagctat
atcgtgatgaatccaacatggacagtaccgcggagtatttcaggtggcattatcaaaaaa
atgaaagaaaacccaaactacttaaacgagaaagattttgttgtggttgatagtcgccgt
aacccagtggatagcaagagtattgattgggcaaatgctagtcgtaagaactttccgtac
tggtttgtacaacaaccttcagagaataattcattgggacaaattaaatttatgtttcct
aataaatactcaatttatttgcacgacacccctgcaaaaacattattccagcaagaccaa
cgtgcatttagccacggctgtgtaagagttgatgacccattcaccttagctgagaaaata
ttagaaacgtcagataattggagtcgtagcgacattgatgacgccattgctgcaaaagag
actacaaaaatcagcttatcaaaaccgctagatgtacttttaatgtactggacagtcgca
ggtgacgacgagagcttacaattttataccgatgtctataatcgcgatggcgcgttatta
aaagcactcaccacgccattagcaaacaatacaatttag
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