Pseudoalteromonas shioyasakiensis: KQ246_07330
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Entry
KQ246_07330 CDS
T08873
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho03030
DNA replication
psho03430
Mismatch repair
psho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQ246_07330 (dnaX)
03430 Mismatch repair
KQ246_07330 (dnaX)
03440 Homologous recombination
KQ246_07330 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psho03032
]
KQ246_07330 (dnaX)
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_07330 (dnaX)
Enzymes [BR:
psho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQ246_07330 (dnaX)
DNA replication proteins [BR:
psho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQ246_07330 (dnaX)
DNA repair and recombination proteins [BR:
psho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQ246_07330 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_18
Herpes_V23
AAA_16
AAA_7
AAA_assoc_2
AAA_2
AAA_19
Rad17
PIF1
Mg_chelatase
nSTAND3
TsaE
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QWV06209
LinkDB
All DBs
Position
complement(1587497..1589944)
Genome browser
AA seq
815 aa
AA seq
DB search
MSYQVLARKWRPQTFHELVGQSHVKQALVNALTQNRLHHAYLFTGTRGVGKTTIARIFAK
SLNCDKGISAEPCGQCSSCTDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLNALSQ
SEIHDQLAHVLNQEQLSFDDKSLSILAKAADGSMRDALSLTDQAIAQTNGSINHQAVQTM
LGLMDTQYSQTMLAALLCQDGDALLQEVKAVVSRNPNFVALLDDLIALTHLIQLVQLVPS
AAALDDTNRDFIEQVAQTTDAQQMQVYYQLLLNGKKDLQWAPDAKLGFEMIMLRLLAFQP
TQFAQSQTPTNTQQQVKPSGAGALRDILKKSTAQREQAASEQALLAQSSAQTTAVPSEPQ
QIQAEPIEAEPVQAAKAETVHSQEPDQQVEATAVVQSGVEQQPQQSVETAMTAEVEPAPK
QQEQSYSEQVPAAEYSPQEYSSQDYMIDHDAQMDSSLAAQYDDVMNSAYDQGFTANEAPQ
QQQTAPVQLQQQQSQAQSAIARILQDRNISGAGRLSGAATQTNAKAEQQSEAKPKAEPPA
QQSTATTNIQPQQQAMAAEVKKPIPQQTGESSNKVKKVDFREKHQTITENLAPELLEQIN
PQKVPEPVVEEASIPVPDDFESPISSIKFAHEQDEWAYLIKRMGLGGRMRQFALHSIFTK
QNNQLHIEVDSSQRHLDSAVLRQKLNAALSEIYGHNVELSIEFADGVIDSPYLIQQKIDA
GRHQQAIDVINSDENIVQFQQLFSAIIDENSIQAL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcaaggaaatggcgaccacaaacctttcacgagttagtgggg
cagtctcatgttaaacaagcattagtgaatgcattaacacaaaatagactccatcatgct
tatctctttactggaacccgtggggtgggtaaaacaaccattgcacgtatattcgcaaaa
agcctcaactgcgataagggtatctctgcagagccatgtggccaatgttcaagttgtact
gacattgaagcaggtcgttatattgatttattagaaatcgatgcggcatcgcgtaccaaa
gtagaagatacccgcgaaatccttgataacgttcaatacgcaccaacacgtggtcgttac
aaggtatacctaatcgatgaagttcacatgctgtcaaagcatagtttcaatgcattacta
aaaacattggaagagcctccagagcatgtgaaatttttattagcgacaactgatccgcaa
aaactgcccgtaacgattttatcgcgttgcttacagtttaatcttaatgctttgtcgcaa
tcagaaattcatgatcagcttgcccatgttcttaatcaagaacagctaagttttgatgat
aaatcattgtctattttagctaaggccgctgatggtagtatgcgtgatgcactgagcctt
acagaccaagcaattgcgcaaaccaacggcagtataaatcatcaggcagtacaaaccatg
cttggcttgatggatactcaatatagccaaaccatgttagcggcgctactgtgccaagat
ggcgatgcactacttcaagaagtaaaagcggtcgtaagtcgaaaccctaactttgtagcc
ttgctcgacgatttaatcgccctgacgcaccttattcagcttgtgcaactcgtgcctagt
gcagcggcacttgatgatactaaccgtgattttattgagcaagtagcgcaaaccactgat
gcacagcagatgcaggtttactaccaattgctattaaatggtaaaaaagatttgcagtgg
gcacccgatgctaaactaggttttgaaatgattatgttgcgtttgttggcattccaacct
acgcaatttgcacaaagccaaacaccaacgaatacccagcagcaggttaagccaagtggt
gccggtgcactgcgtgatattttgaaaaaatcaacggcgcaacgtgaacaagcagcgtca
gagcaagcacttttagcacaaagttctgcacagacaactgctgttccttcagagcctcag
caaattcaagctgagcctattgaagctgaacctgttcaagcagctaaagcagaaacagtg
catagccaagagcctgaccagcaagttgaagcaacagcggtagtacagtctggtgttgaa
caacagcctcagcaatctgttgaaactgcaatgaccgctgaagttgaaccagcgccaaaa
cagcaagagcaaagctactcagagcaagtacctgcagctgaatactctccacaggagtat
tcttcgcaagattacatgattgatcatgatgcacaaatggactcatcacttgctgcgcaa
tacgatgatgtgatgaatagcgcctatgatcagggctttactgcaaatgaagcacctcag
caacagcaaactgcaccagtgcaattacaacagcagcaaagtcaggcgcagtcggccatt
gctcgtattttacaagaccgcaatatctcaggtgctgggcgtttaagtggtgctgcaacg
caaacgaatgctaaagcagaacaacaatctgaagcgaagcccaaagcagagccgccagcg
caacaaagcacagccacgaccaatattcagcctcagcagcaagcaatggctgctgaagta
aaaaagcccatcccccagcaaacgggggagagcagtaataaagtaaaaaaagtcgacttt
agagaaaagcatcaaacaattactgaaaacttagcgcctgagctgcttgagcagatcaac
ccgcaaaaagtgccagagccagtagtagaagaagccagtattccggtccctgatgatttt
gaaagtccgatcagcagtattaaatttgcacacgaacaagatgaatgggcgtatttaata
aagcgcatggggctcggcggacggatgcgccaatttgcactgcattcaatttttaccaag
cagaataaccaactgcacattgaggttgactcgtcacagcgccatttagacagcgcagtg
ctaagacaaaagctcaatgctgcattaagtgaaatttacggccataatgtagagcttagt
atcgagtttgctgatggcgtaattgattcaccgtatttgattcaacaaaaaattgatgcc
ggacgtcatcaacaagcaattgatgtaataaatagcgacgaaaacatagtgcaatttcaa
cagttatttagcgctataatcgatgaaaacagtattcaggcattgtaa
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