Pseudoalteromonas shioyasakiensis: KQ246_07355
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Entry
KQ246_07355 CDS
T08873
Name
(GenBank) tRNA-dihydrouridine synthase
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psho03016
]
KQ246_07355
Transfer RNA biogenesis [BR:
psho03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
KQ246_07355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-ProteinID:
QWV06212
LinkDB
All DBs
Position
1593235..1594212
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AA seq
325 aa
AA seq
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MRLVLAPMEGVVDFKMRQLLTDLGGFDLCVTEFVRVVEDTLPERVFHRYCPELKTGGYTR
AGTPVRIQLLGQVANALAENAVKAIRLGSHGIDLNFGCPAKTVNKSKGGAVLLKDPEHMY
EIIKAVRDAVDPRHEVSAKIRLGFDDDSNSQEIVDAVVSAGASSLAIHARTKRDGYNPPA
YWEKIPPLIKNKNISVVANGEIWQVKDAILCQKRSHCQDLMLGRGALAMPDLAKQIKSHA
QNEHYTPMLWEHVIYHIIHSSMHQDESKCEKYFASRTKQWLGYLKRQYPQASVLFDEIRR
LKAKDEVADVLRKYAKAPSIDTNHN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgactagttttagcaccgatggaaggtgttgtagattttaaaatgcgacaactccta
actgatttaggtggatttgatttatgcgttacagagtttgttcgtgtcgtcgaagacacg
ctacccgagcgcgtgtttcatcgctattgtcctgagctaaaaaccggtggctatacccgt
gcaggtacacctgtacgtattcaattactgggtcaagttgccaatgctttagctgaaaat
gcagttaaagcaatacgcctaggctcacatggaatcgacttaaactttggttgccctgct
aaaacggtaaataaaagtaaaggtggtgcggtacttttaaaagaccctgagcatatgtac
gagataatcaaagccgtacgtgatgctgtcgacccacgccatgaggtgagtgctaaaatc
agacttggctttgatgatgatagtaatagccaagaaattgttgatgctgttgtaagcgca
ggcgcttcaagtcttgctattcatgccagaactaaacgagatggttataaccctcctgct
tactgggaaaaaatccccccattaatcaaaaacaagaatatttcagtagttgctaacggt
gaaatttggcaagttaaagatgctatactttgccaaaaaagaagccattgccaagactta
atgcttggtcgtggcgcactagcaatgcctgatttagcaaaacaaataaagtcacatgca
caaaacgaacattatactcctatgttatgggagcatgtgatataccacattattcattca
tcaatgcaccaagacgaaagtaaatgtgaaaagtactttgcttctcgaactaagcaatgg
ctcggttatttaaaacgccaatacccacaagcaagcgtactttttgatgagatacgtcgc
ttaaaagccaaagatgaagtagctgatgtgctaagaaagtatgccaaagcgccgagtatt
gatacaaatcataattag
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