Pseudoalteromonas shioyasakiensis: KQ246_08025
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Entry
KQ246_08025 CDS
T08873
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho00550
Peptidoglycan biosynthesis
psho01100
Metabolic pathways
psho01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQ246_08025 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQ246_08025 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
KQ246_08025 (mrdA)
Enzymes [BR:
psho01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KQ246_08025 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KQ246_08025 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QWV06310
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All DBs
Position
1720302..1722182
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AA seq
626 aa
AA seq
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MRKHRPTIRDHSAEANLFARRAFVGFVFVTLLIGVLLSNLYNIQVIDHQDYQTRSNDNRI
KVIPIAPNRGLIYDRNGVLLAENKPVYNLEVIPEEVDDLDKALTEVKQIIEISEQQKADF
LDDIKHNRRFKSQVLKARLDETEVAKFSVNQHKFPGFSIEARLARFYPYGDTLTHALGYV
AKLNKKELTKLEAEDQATNYRATHDIGKLGIEKYYEELLHGMVGSQRVEVNNRGRVIRSL
SLTPPEPGHDLVLTLDIGLQQIAQHALKDMRGAVVVLDAKDGGVLALYSNPSYDPNLFVH
GISSTDYKKLLNPDRPLINRTTQGRYAPASTVKPLMAILALEEGLVTEQTQMWDPGFFQI
PNVDHKWRDWRRWGHGHVDVYKAIEESCDTYFYDVAYRLGITKISDFMYQFGFGELSGID
IHEETSAIMPSKEWKEGRFRESWWRGDTISVGIGQGYWTATPMQIANATNILVNRGLDHP
PHLVQVAKKENEVTQINNDEKPPVELKNPHHWQIALDAMHNTVHKVTGTAHKAFRGASYD
PAGKTGTAQVVSIAQGERYDAKSLKERQRDNAIYVGFAPYNDPQIVVSVVVENTGGGSTV
GAPIARQLMDYYFSANPIQITQSDAP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaacacagacccacgattagagaccactcggctgaggcaaacttatttgctcgc
cgtgcctttgtgggctttgtgtttgttacattgttaattggtgtgttgctatctaacctg
tacaacatccaagttattgatcatcaagattatcaaacacgttcgaacgataaccgaatc
aaggtcattcctattgctcctaaccgagggctaatttacgacagaaatggcgtattattg
gctgagaacaaacctgtttacaatcttgaagtgatccctgaagaagttgacgatcttgat
aaagctctaacagaagtaaaacagatcatcgaaattagtgagcaacaaaaggccgacttt
ttagatgatattaagcacaatcgccgtttcaaaagccaagtattaaaggcccgtctagac
gagactgaggtagcaaagttctctgttaatcagcataaattccctggttttagcatcgaa
gctcggttagctcgtttttacccctatggtgataccctcacccatgccttaggttatgtt
gccaaactcaacaaaaaagaactcactaagcttgaagcagaagatcaagctactaattac
cgtgcaactcacgacattgggaagcttggtattgagaaatattatgaagagctcctgcat
ggcatggtgggttcacagcgtgttgaagtgaataaccgtggccgagttattcgttcattg
agccttactccacctgaaccaggtcatgatttagtactcaccctggatattggcctgcaa
caaatagcccagcatgctctaaaagatatgcgtggtgccgttgtcgtacttgatgcaaaa
gatggcggcgtattagctctgtattcaaaccccagttatgatccgaacttatttgtacat
gggatcagtagtaccgactacaaaaagctgctcaacccggaccggccacttataaaccga
actacacagggtcgttacgcaccagcatcgacagtaaaacctctcatggctattttagcg
cttgaggaaggcctcgttaccgagcaaacacaaatgtgggatccgggcttttttcagatt
ccaaatgtcgatcacaaatggcgtgactggaggcgttggggtcatggtcatgttgatgtt
tacaaagccattgaagagtcttgcgatacctacttttacgacgttgcgtatcgtttaggc
attactaaaatcagtgattttatgtatcaatttggatttggtgagttatctggtattgat
atccatgaagaaacttctgcaataatgccatctaaagagtggaaagaaggtcgctttaga
gagtcttggtggcgtggcgatacaatttcagtggggatcgggcaaggttactggactgcc
acaccaatgcagattgctaacgcaaccaatatattggtaaaccgtggactcgatcatcca
ccacatcttgtgcaagtagccaaaaaagaaaatgaagtaacgcaaataaacaatgacgaa
aagcccccagtggaactaaaaaatcctcatcattggcaaattgctctcgatgctatgcat
aatacagtgcacaaagtcactggtactgcacataaagcatttagaggggcaagttacgac
cctgctggcaaaacaggtactgcgcaggtggtaagtatcgcacaaggtgaacgttacgac
gctaagtcgctaaaagaacgtcaacgagataacgctatctatgttggttttgcaccttat
aacgacccgcagattgttgtctctgtagttgtagaaaacactgggggtggtagtacggtt
ggagctcctattgctcgtcaattaatggattactacttctcagctaacccaattcaaatt
acccaaagtgacgcgccatga
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