Pseudoalteromonas shioyasakiensis: KQ246_09285
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Entry
KQ246_09285 CDS
T08873
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_09285
Enzymes [BR:
psho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KQ246_09285
DNA repair and recombination proteins [BR:
psho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KQ246_09285
Prokaryotic type
KQ246_09285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Swi5
Motif
Other DBs
NCBI-ProteinID:
QWV03780
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All DBs
Position
1993676..1995172
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AA seq
498 aa
AA seq
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MSNLKKQAINIVWFKRDLRFSDHTPLAKAVQSDLPCLLVYNFEPLLIEDPHYSLRHWRFV
YQSLVDMNKQLKKYQTQVAIYNQEMISLFKTLNDEFEIKTVYSHQEIGLLNTYNRDKDVR
HWLEKRAITWNETPLGGVIRARPKQCDWQDHWHTVMNESLDNPDWLKFKAILPKKYQIPN
YINKLASHDKYFQYGGPHAARATLRSFIESRAAGYQKGISSPSQSRYACSRLSPYLAWGN
LSLRQVYQTLKYYLPKQPRSWRRSLHAFESRLHWHCHFMQKFETQCSMEFAPQNAGYLRY
PYRDDELVAEHLKRFEQGQTGIPIIDACMRCLAATGYINFRMRAMLVSFMTHHMNIHWQS
VSFILSRYFLDFEPGIHYPQIQMQASVTGTNTIRLYNPIKQSKDKDPDGFFIKTWCPELK
ELPIEDLHQPWQQPPMEAVFNNFKLGEDYPEPMVDIERAAKDARERLWSFRERDDVKRGT
KAVLRQHITSLKRQQHGS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttaaaaaaacaagcaattaatatagtgtggtttaagcgtgatttaaggttt
tctgatcacacacctcttgccaaagcagtacaatctgatctcccttgcttgttagtttat
aacttcgagcctttgctgattgaagaccctcattacagcttaagacattggcgctttgtt
tatcagtcattagtcgatatgaataaacaacttaaaaagtatcagactcaagttgctatt
tataatcaagaaatgatcagtttatttaaaacacttaatgatgaatttgaaataaagacc
gtatacagtcatcaagaaattggcctactaaacacctacaacagagacaaagatgttagg
cattggcttgaaaaaagagcaattacatggaatgaaacacctctgggcggtgtaattaga
gctcgtcccaaacaatgtgactggcaagatcactggcacacagtgatgaatgaatccctt
gataaccctgactggctcaagtttaaagcaatactacctaaaaaatatcaaataccgaac
tacataaataaattagcatcccatgataaatattttcaatatggcggacctcatgctgct
agagctaccctgaggagttttatcgaaagtcgtgctgcaggttatcaaaaaggaatttcc
agcccatcacaaagtaggtatgcatgctctaggctctctccttatttagcatggggaaat
ttaagtctgagacaagtttatcagacattaaagtattacctccccaagcaaccaagaagc
tggcgtcgttcattacatgcttttgagtctaggcttcattggcattgtcattttatgcaa
aagttcgaaactcaatgcagtatggagtttgcaccgcaaaatgcaggctacctgcgttac
ccttatcgcgatgatgaactcgttgcagagcacttaaagcgctttgagcaaggtcaaaca
ggtattcctattattgatgcttgcatgcgctgtctagcagcaacgggttacattaacttt
cgaatgcgcgctatgttagtgagttttatgacccatcatatgaatatccattggcaatca
gtcagctttattttatcgcgttattttttagattttgagccgggtattcactacccacaa
atccaaatgcaagcatcggtcacaggaactaacactattcgtttatataacccaattaag
caatcaaaagacaaagatcctgatggcttttttattaaaacctggtgccctgagcttaaa
gaattacccatagaggatctccaccagccatggcaacagccaccaatggaagccgtgttt
aataattttaaactcggcgaggactacccagagcccatggtcgatatagaacgcgctgcc
aaggatgctcgtgagcgattatggtcatttcgagagcgtgatgatgtgaagcgtggcaca
aaagccgtactacgccagcatattacaagccttaaaaggcaacagcatggttcataa
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