Pseudoalteromonas shioyasakiensis: KQ246_09865
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Entry
KQ246_09865 CDS
T08873
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psho03032
]
KQ246_09865
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_09865
Enzymes [BR:
psho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KQ246_09865
DNA replication proteins [BR:
psho03032
]
Prokaryotic type
DNA Topoisomerases
KQ246_09865
DNA repair and recombination proteins [BR:
psho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KQ246_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
MBD
Motif
Other DBs
NCBI-ProteinID:
QWV03880
LinkDB
All DBs
Position
complement(2119077..2120051)
Genome browser
AA seq
324 aa
AA seq
DB search
MKLIYVDDNLPGITRKSHSKCWLYYDPTGKRINDKSEIARLDALAFPPAYKDVWFCPEEN
GHILATGYDTKGRKQYLYHPDFREQQELKKFEVCELFGNKLPLLRAKLAEYLEGNTLDYQ
RTLAAVVRLMDLGSLRIGSKRNAKENNSFGATTLRRRHAKITGKNIRLEYKAKSGKVREV
NLTDRVLSTIIKELQDLPGQNLFQYKEDGECIPVTSREVNQFIQHVMGEEFSAKHFRTWR
ASVLAFEAFYNAKKKLPLCDMLETVSSHLGNTPTIARNSYIHPALIDLCKKDENSQVAIR
KQLKLPRKTKYLNRYERGLLLFLS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaatttatgttgatgataatttgcccggtattactcgaaaaagtcactctaaa
tgttggctttactacgaccctacaggtaagcggattaatgataaaagtgaaatcgcccgt
ttagatgcactagcattccctcctgcatacaaagatgtttggttttgtcctgaggaaaat
ggccatatcttagcaactggttacgatacaaagggaagaaaacaatacctttatcatcca
gattttagagagcagcaggaactaaaaaagttcgaagtgtgtgagcttttcggaaataaa
ttacctttacttagagcaaagttagctgaatatttagaaggtaatacacttgactatcaa
aggacattagccgcagttgttagattgatggatttaggctctttgaggataggatctaaa
cgaaacgcgaaagaaaataatagttttggagcgacaaccttacgtcgccgccatgcgaag
ataacagggaaaaatattcgcttagaatataaagctaaatctggcaaagtgagagaggtt
aaccttacagatcgtgttttgagcaccattattaaagagttgcaagatttacccggacaa
aacctgtttcaatacaaagaggatggtgaatgtattcccgtaacttcacgtgaagttaat
caatttattcagcatgtaatgggagaggagtttagtgcaaaacactttagaacctggcgt
gcaagtgttttagcattcgaagctttttataatgcaaagaaaaagctccctttgtgcgac
atgctagaaacggtatcgagccatttgggtaatacgccaacgatagcacgtaattcttat
attcacccggcgcttattgatttatgtaaaaaggatgaaaacagccaggttgctataaga
aagcaattaaaactgccccgtaaaacgaagtatttgaatagatacgagcgaggactgcta
ctctttctcagctag
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