Pseudoalteromonas shioyasakiensis: KQ246_10265
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Entry
KQ246_10265 CDS
T08873
Symbol
pbp4b
Name
(GenBank) penicillin binding protein PBP4B
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho00550
Peptidoglycan biosynthesis
psho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQ246_10265 (pbp4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psho01002
]
KQ246_10265 (pbp4b)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
KQ246_10265 (pbp4b)
Enzymes [BR:
psho01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KQ246_10265 (pbp4b)
Peptidases and inhibitors [BR:
psho01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
KQ246_10265 (pbp4b)
Peptidoglycan biosynthesis and degradation proteins [BR:
psho01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KQ246_10265 (pbp4b)
BRITE hierarchy
Motif
Pfam:
Beta-lactamase
Amidase_2
PG_binding_1
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
QWV03935
LinkDB
All DBs
Position
complement(2204046..2206493)
Genome browser
AA seq
815 aa
AA seq
DB search
MSFTPLKTFLKQLCYLSSAALLVSCASNPYTYTQSANYSHRVKFLVMHYTAIDYEKSMHA
LVDEGGLSSHYLLPESGDPSYPKDDLEIIQLVDEKDRAWHAGRSFWQGREDLNDHSIGIE
IVNVPTCHIPEQTKLAMENDASKLCIFPDYDAKQIELLIKLSKDILARNPDIGPTQVIGH
SDIAPSRKNDPGPRFPWYQLYKAGIGAWYDSDTLDKYWQVFSASKPSVELMQKALRSYGY
EVIATGQLDSQTLDALSAFQMHFLPWHVSGNNDARSAAVLFALLDKYFPKKLERLFQEYQ
QQQQAVEPEPKTLSNAQVIARIPALDPSSRALVNDRGTFTAYKGRGEIIIENQDATSADI
FINGEKINIASPLIAEKIYQYSLAKRTRDGINTYKVENVLPEGASLTLRFPYPKLDKSSS
QKRFTAVDELINQEIQEGFPGAVLAVVKDGKLIKLSHYGAAKKYHADGSELNSPQAMQND
TLFDIASNSKMFATNFALMKLASEGKLDVEKPLFYYLPEFRGSGREQRLVKDLLTHSAGY
PAVVDFHRKDNKFGERFFSQNSLRTKNLLLTGVPFVAGRNVKHLYSDIDYMLLGVLVERI
SGMALDTYVESQIYQPLGLTHTVYNPLQKGFLASQIAATEINGNTRGGRIEFENIRTDVL
QGEVHDEKAFYALGGVAGHAGLFSTASDLSVLMQVLLNGGGYDNKQIFTPQVLEQFTKPE
ASDETYGLGWRRAGHQARKWHFGPYASPRAFGHTGWTGTVTVIDPEYDLAIVLLTNARHT
PIEGSQENYEFVGKRFETGKYGSIISLIYESILNH
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagttttacccctttgaaaacatttcttaaacagctgtgttatctcagtagtgcggca
ttattagtaagctgtgccagtaatccatatacctacacacagtcagctaattatagccac
cgtgttaagtttttagtaatgcattacaccgccattgattacgaaaaatcaatgcacgct
ttagtcgatgaagggggcttgagctctcattatttattacctgagtcaggcgatccaagt
tatccaaaagacgatttagaaattattcagctcgttgatgaaaaagacagagcatggcac
gccggacgcagtttttggcaaggccgagaagatttaaatgaccattcaattggtattgaa
atagtgaatgtaccaacgtgtcatattcctgagcaaactaagcttgcgatggaaaatgac
gctagtaagttatgtatttttccagactatgacgccaagcaaatagagctattaataaag
ttaagtaaagatattcttgctcgtaaccctgatattggcccaactcaagttattggccat
tctgatatagccccaagccgtaagaacgaccctggtccgcgctttccttggtatcaacta
tataaagcgggtatcggtgcgtggtacgacagcgacacccttgataaatattggcaagta
tttagtgcatcaaaaccatcagttgagttgatgcaaaaagcgctgcgcagctacggctat
gaggtgattgcaacggggcagcttgattcgcaaacgctagatgctttaagtgcttttcaa
atgcactttttgccttggcatgtaagcggtaataatgatgcaagaagtgctgcagtgtta
tttgctttattagataaatactttcctaaaaagcttgagcgattattccaagaataccag
caacaacagcaagcggttgagccagagccaaaaacactttctaatgcacaagtaatcgcg
cgaattcctgcgcttgatccgagtagtcgcgcgctagtgaacgacaggggcacatttact
gcctataaaggtcgcggtgaaatcatcattgaaaaccaagatgcaaccagtgctgatatt
ttcataaatggtgaaaaaattaatattgcctcaccattaatagccgaaaaaatatatcaa
tacagtttggctaaacgcacccgcgatggcataaacacgtataaagtagagaatgtattg
cctgaaggggcaagcttaaccttacgttttccctatccaaagctggacaaaagcagctca
caaaaacgctttactgccgttgatgaattaataaatcaagagattcaagagggctttccg
ggcgctgtacttgccgttgttaaagatggcaaactgattaaattaagccattatggtgcg
gctaagaagtatcatgctgatggcagtgagcttaacagcccacaagccatgcaaaacgat
accttgtttgatatagcttcaaactcaaaaatgtttgccactaactttgcactcatgaag
cttgccagcgaagggaagctcgacgtagagaaacctttattttattacctgccagaattt
agaggcagcgggcgtgagcagcgcttagtaaaagatttactcacacacagtgcgggttac
cctgcagtggttgattttcatcgcaaagataataaatttggtgagcgctttttttcgcaa
aacagcctgcgtactaaaaacctgctattaactggcgtccctttcgtcgctggccgtaac
gtaaaacacttatattctgatatcgattatatgttgctaggtgtactggttgaacgcatt
agtggtatggcgctcgatacttatgttgaaagccaaatttatcagccgcttggtttaacg
catacagtttataacccgctgcaaaaaggttttctagcctcacaaattgccgctactgag
attaatggtaacacccgaggtggacgcatcgagtttgaaaatattcgtaccgatgtacta
caaggtgaagtacatgacgaaaaagcgttttatgccttgggtggcgtagcaggacatgca
gggctttttagtaccgccagtgacttgtcagtgttaatgcaagtactacttaatggtggc
ggctacgataacaagcagatttttacaccgcaagtactcgaacaatttacaaagccagag
gcgagtgatgagacctatggcttagggtggcgacgagcggggcatcaagcgcgtaaatgg
cattttggcccttatgccagcccgcgagcttttggtcatacaggctggactggcactgta
accgtaatagatcccgagtatgaccttgccatcgtactactaactaatgctcgtcataca
cctattgaaggttcgcaagaaaattacgagtttgttggcaaacgtttcgaaacgggtaag
tatggctctattatctcactgatttatgagagtatattaaatcactag
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