Pseudoalteromonas shioyasakiensis: KQ246_10400
Help
Entry
KQ246_10400 CDS
T08873
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psho03009
]
KQ246_10400 (srmB)
Enzymes [BR:
psho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQ246_10400 (srmB)
Ribosome biogenesis [BR:
psho03009
]
Prokaryotic type
rRNA helicases
KQ246_10400 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
AAA_11
PhoH
WSD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QWV03954
LinkDB
All DBs
Position
2231304..2232536
Genome browser
AA seq
410 aa
AA seq
DB search
MQFSEFDIDNKLLNAINKMGFDTPTSIQQQAIPEALQGRDILASAPTGTGKTAAFLIPAI
QYLLDFPRREPGFARVLIMTPTRELAYQIHEQCELLAAQTHLKIGVVTGGINYGTHKEIF
ESNNDILIATPGRLMEYLETENFHAENVEVLILDEADRMLDMGFRKEMLRICDEARNRRQ
CFLFSATLEGDSVELFAERILNDPALLEAESSRKEKGKIHQWVHLADDYNHKLKMLVETL
NGDDIQKAIVFVKTRERLETLIGELNNEGIRVAWLRGEMPQDKRMKTMENFHSGRNNILV
ATDVAARGIDVADISHVINFDMPRTADVYVHRIGRTARAGKKGIAISFVEAHDVAIVGKV
ERYIEQKLKRRVIKGLEPQHKEAKLPSKKKKDPEKMKAKKKAKSKTKKKK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatttgatattgataacaagctgttaaatgccattaataaaatgggt
tttgatacgccaaccagtattcaacaacaagcgatccctgaagcacttcaaggtcgtgat
attttggcatctgcccctactggtacgggtaaaacagccgcgtttttgatccctgcaatt
caatacttgctcgatttcccgcgtcgtgaacctggttttgcacgtgtcttgatcatgaca
ccaacccgtgagcttgcttatcaaattcatgagcaatgtgaattacttgcagcacaaact
catcttaaaattggcgttgtgactggaggtataaactacgggacccacaaagaaattttc
gaaagcaataacgacattctaattgcgacgccgggacgcttaatggagtatctcgagaca
gagaactttcatgccgaaaacgttgaagtgctgatccttgatgaagcagaccgcatgtta
gacatgggctttcgtaaagaaatgcttcgcatttgtgatgaggcgcgaaaccgccgccaa
tgtttcttattttcagccacccttgaaggtgacagcgttgagttatttgcagagcgtatc
ttaaatgatcctgcactacttgaagctgaatcatcacgaaaagagaaaggcaaaattcac
cagtgggttcaccttgcagatgactacaaccacaagctgaaaatgctagttgaaacgtta
aatggtgatgacattcagaaagctattgtgtttgttaaaactcgtgagcgcctagaaaca
ctgattggtgaattaaacaacgaaggcattcgtgttgcttggttacgcggtgaaatgccg
caagacaaacgaatgaagacaatggagaacttccactctgggcgaaataatatattagtt
gcaacggatgttgccgcacgtggtattgatgttgctgatatcagtcacgttatcaacttt
gatatgccacgcaccgcagatgtatatgttcaccgtattggtcgtaccgctcgcgctggc
aaaaaaggcatcgcgatttcatttgttgaagcccatgacgtagcaattgttggtaaagtt
gaacgttatatcgaacaaaaactcaaacgccgagttatcaaagggctcgagccacagcat
aaagaagctaagctcccatccaaaaagaagaaagatccagaaaaaatgaaggcaaagaaa
aaagccaagtctaaaactaagaagaaaaaatag
DBGET
integrated database retrieval system
