Pseudoalteromonas shioyasakiensis: KQ246_10870
Help
Entry
KQ246_10870 CDS
T08873
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KQ246_10870 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psho03400
]
KQ246_10870 (mutS)
DNA repair and recombination proteins [BR:
psho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KQ246_10870 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QWV04027
LinkDB
All DBs
Position
2343020..2345593
Genome browser
AA seq
857 aa
AA seq
DB search
MSFDLYAPHTIKQQTPMMQQYLKIKAEHRDILLFYRMGDFYELFFDDAKRAAQLLDISQT
HRGKAGGDPIPMAGVPYHAVENYLARLVQMGESVAICEQVGDPATSKGPVERKVVRIVTP
GTISDEALLQERQDNLLTSVWQNKQGAYGIAYLDINSGRFNVLEVNTDEAFSSTLQRLAP
AELLYSETFANVHLIEHIKGARRRPEWEFDLDTAQHLLCDQFGTKDLVGFGVEKAHAALV
AAGCLMQYVKDTQRIALPHIRAITLEQNEHAVILDAATRKNLELTVNLSGGYENTLAQVL
DKTATAMGSRLLKRRIHTPVRSKTELNSRLNAISAIIDAQLCGELQESLKQIGDIERVIA
RLALCTARPRDLTRLRSALQALAPLHELLMDANDPRISQIIAKSQQLPELQDLLERAVIE
TPPVLIRDGGVIAPGYNSELDEWRALSQGATDILEKLEERERERTGISTLKIGYNKVHGF
FIEVSRANSHLVPADYIRRQTLKNNERYIIPELKEHEDKVLGSQSKALALEKQLYEQLFE
FIAPHIEQLQTMAAVLADLDVLNNLAERAQALNYAKPILCDNDNISIKQGRHPVVEQVMK
DPFIANPVELNNDRKMLIITGPNMGGKSTYMRQTALIVLMAHIGCYVPADSAEIGNIDRI
FTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEIGRGTSTYDGLSLAYATAD
YLASKIAAKTLFATHYFELTELAEQKTGLVNVHLDAIEHNDTIAFMHTVLEGAASKSFGL
QVAALAGVPKAVIQQAKQKLKMLENHQPVTAPIEQQQQTLSFDDEPSELELTLEQLDPDS
LTPRQAHQLLYQLKDLL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatctttatgcaccgcacactataaaacaacaaacccctatgatgcagcag
tatctaaaaataaaagccgagcatcgggacattttattgttttatcgtatgggcgacttt
tacgaacttttctttgatgatgccaagcgtgcagcacaacttcttgatatttctcaaaca
catcgtggtaaagccggtggtgatccaataccaatggcaggcgtaccctatcacgcagtc
gaaaactacttagctcgccttgtacaaatgggtgaatcagtggctatttgtgaacaagtt
ggcgacccagcaactagcaaaggcccagttgaacgtaaagtagtacgtattgttacgccg
ggcacgatttctgacgaagcgctgttacaagaacgccaagacaacctgctaaccagtgtt
tggcaaaataaacaaggcgcttatggtattgcttatttagatattaactctggccgattc
aatgtattagaagttaatacggatgaagcgtttagttcaacattacagcgtttagcccct
gctgaactgctttatagtgaaacatttgcaaatgttcacctaattgagcatatcaaaggg
gcgcgtcgccgcccagaatgggagtttgatttagatactgctcagcatttactatgcgac
caatttggcaccaaagatttagtaggttttggtgtagaaaaagcacacgcggctttagtt
gctgcaggctgcttaatgcaatacgtaaaagatactcagcgcattgccttaccgcatatt
cgtgctattacccttgagcaaaatgaacacgcggtgatcttagatgcagcgacccgtaaa
aacctcgaactaacagttaatttatcgggtggttacgagaatacacttgcacaagtactt
gataaaacagcaactgcaatgggttctcgcttattaaaacgccgtattcataccccagtg
cgcagcaaaacagagctcaattcgcgactaaacgctatcagcgcaattatcgatgctcaa
ttatgtggtgagctacaagaatcgttaaagcaaattggcgatattgaacgtgttattgca
cgtttagcgctttgtacagcaaggccgcgtgatttaacgcgccttcgaagtgcattgcag
gctctagcgccactacacgaattacttatggatgctaacgatccgcgtattagccaaatt
attgcaaagtcgcaacagttacctgaactacaagatttactagaacgtgctgtaatcgaa
accccaccggtgcttatccgtgatggcggtgtaattgcaccaggttataacagcgaactt
gatgagtggcgtgcgctaagccaaggtgcaaccgatattcttgaaaagcttgaagaacgt
gagcgtgaacgtacaggcattagcaccttaaaaattggctataacaaggtccacggcttt
tttattgaagtaagccgcgctaattcacatttagttcctgcggattatattcgccgccaa
acgctaaaaaataatgagcgctatatcatccctgagcttaaagagcacgaagataaagta
cttggtagccaatcaaaagccctcgcgcttgaaaaacagctatatgagcaattatttgag
tttatcgctccgcacattgagcagctacaaacaatggcagccgtactggcagacttagat
gtactgaacaatttagcagaacgagcgcaggcgcttaattatgctaagccaatactgtgc
gataacgataacatcagtattaaacaaggtcgccacccggtggtagagcaggttatgaaa
gacccgtttattgccaatccagtagagcttaataacgaccgtaaaatgttgattatcaca
ggtcctaatatgggtggtaaatcaacctacatgcgtcaaactgcgcttattgttctgatg
gcccacattggctgttacgttcctgctgatagtgcagaaatcggtaatattgaccgtatc
tttacgcgtattggcgcaagtgatgacttagcatcagggcgctcaactttcatggttgaa
atgacagaaactgcaacgattttaaataatgctacagcacaatcactggtgctgatggat
gaaattggtcgcggcacctcaacctatgatgggttatcgcttgcctatgcaacagctgac
tatttagcatcaaaaattgccgccaaaaccttatttgcgacccattattttgagttgaca
gaactcgccgagcaaaaaacaggactggtgaatgtgcacctagatgccattgagcataac
gacacaattgcctttatgcataccgttcttgaaggcgctgcaagcaagagctttggctta
caagttgcagccctagcaggtgtgccaaaggcggtaatccaacaagcaaaacagaaactt
aaaatgctcgaaaatcaccaacctgttacagccccaattgagcagcaacaacaaacatta
agttttgatgatgaaccttccgagcttgaattaaccttagaacagcttgacccagatagc
ttaacgccaaggcaagctcaccaactactgtatcaattaaaagatttactgtag
DBGET
integrated database retrieval system
