Pseudoalteromonas shioyasakiensis: KQ246_14325
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Entry
KQ246_14325 CDS
T08873
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psho02000
]
KQ246_14325
Transporters [BR:
psho02000
]
Other transporters
Pores ion channels [TC:
1
]
KQ246_14325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QWV04563
LinkDB
All DBs
Position
3107890..3110037
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AA seq
715 aa
AA seq
DB search
MRLSAVFIALAAGFSAIVHAQTEVTTSDQTNSKEIEKIEVVGRAFSLYRPTESSFATRTN
TPLEKIPQSIQILPQELISDQAARQITDLYSNIAGVNAFSYSGVTFRGFRQDEILYDGVK
GDPFNGFAVPQLFNIEQVAVLKGPAGAIYGSGNPGGIINYVTKKPKFTSEHSIEVEVGND
DFFSGALESTGTLSESLDNHAYRVGLYRDTEKPFRANTSSDNTIVDLGYTWLINSATELT
TQYTYIEQELGGARLRGVPADDNGNFLTDISWNHNEATDFQNVEAHVYQATLKHEFNDIW
RTDVTTRYFDNKEVQNYHEPRGLVDTDDDGIVDWSNREFRDQVRENEGFSLTANAIAEFI
IADMQHQVLLGSDWYEHDFESAYRTAKQQSKGGPVPGLALNDPEYGLTSADDYDLDSIKP
RLGKTNSTRFGAYLQDQLDITANWSVTAGLRYDRFEDKDLLNQTEFSDSDLTYRIGTSYN
INNMFFPYALHGTGFVPQGASDQETAKGGPFSPETSRINELGLRTKLLEDTLAVNMAVYD
IVRKNILQPSLLGDVAGDGVDDLVAVGEVQSKGFELEVVGDITERWVVTASYAYNDARIT
EANDSIRNQIPDSDKFANAPQNTLGIWTRYELASLSSSISAGLDYVDEQLSLGGQRVKPY
TIYNMAWQTTVDNWQWQLSVKNLFDKEYASSGFIERTGHFPGEPRRVYLSAKYNF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttctgctgtttttattgcacttgctgctggtttttcggccattgtccatgct
caaacagaagttactacttctgatcaaaccaattctaaagagatcgaaaaaatagaagtt
gttggccgtgcgttttctttatatcgcccaaccgagtcaagctttgcaactcgtacaaat
acacctttagagaaaattcctcagtcaatccaaattctgccgcaggagctgatcagcgat
caggctgctcgtcaaattaccgacctttatagcaatattgctggcgttaatgcttttagt
tattcgggcgtgacattccgtggttttcgccaagatgagattttatatgatggcgtaaag
ggcgatcctttcaatggctttgctgtgccgcaattatttaatatagaacaagttgcggtt
ttaaaagggcctgctggcgctatatacggtagtggtaatccaggcggtattattaactat
gtaactaagaagccaaaattcaccagtgagcacagtattgaagttgaagtgggtaatgat
gacttcttcagtggggcattagaaagcacaggaacattgagtgaatcacttgataatcat
gcttaccgtgttggtctttaccgtgatactgaaaagccattccgtgctaacactagcagc
gataatactattgttgatcttggttatacgtggcttattaacagtgcaaccgaattgacc
actcagtatacctatatagagcaagagttgggtggggcacgtttacgtggagtccctgct
gatgataatggcaattttttaactgatattagctggaatcataacgaggcgacagacttt
caaaatgttgaagcccatgtctatcaggctactttaaaacatgagtttaatgatatttgg
cgaacagatgtcacaacacgctattttgataacaaagaagtacaaaactaccatgagcca
agagggcttgtagatactgatgacgacggtattgtagattggagcaatcgtgagtttcgt
gatcaagtacgtgaaaacgaaggctttagtttaactgctaatgcgattgcagaatttata
attgcagacatgcaacatcaagtgctgcttggtagtgactggtatgagcatgactttgaa
agtgcttaccgcacagcaaagcaacagagtaaaggaggccctgtaccaggccttgctctt
aacgatcctgaatatggtttaacctctgctgatgattatgatcttgatagtattaaacca
aggttaggtaaaacaaatagcactcgctttggtgcatacttgcaagatcagcttgatata
actgcaaattggagtgttactgctggcttaagatatgaccgttttgaagataaagatctg
ttaaatcaaaccgagttttctgatagcgacttaacctaccgtattggtaccagctataac
attaacaatatgttctttccttatgcgcttcatggtactggctttgtaccacagggtgcc
agtgatcaagaaacagcaaaaggcggaccattctcgccagagactagccgtattaatgag
ttaggtttaagaaccaaattattagaagacacacttgctgttaatatggctgtgtacgat
atcgtacgtaaaaacattctgcagcctagtttattgggtgatgttgcaggcgacggcgtt
gatgacttagttgcggtgggtgaagttcaaagtaaaggttttgaactagaagtggttggt
gatatcactgagcgctgggtggttactgcaagctacgcctataatgatgcccgtattact
gaagcaaatgacagtattcgtaaccaaattcctgatagcgataaatttgccaacgcaccg
caaaatactttaggtatatggacacgctatgagctagctagtttatcgtcatctatttct
gctggtttagattatgttgatgaacagcttagtttaggtggtcaacgcgttaaaccttac
actatttacaacatggcgtggcaaacaaccgttgataactggcaatggcagctatcagtt
aagaacttgtttgataaagaatacgcaagcagtggctttatcgagcgaacagggcacttt
cctggtgaaccacgccgtgtctatttaagtgctaaatacaacttttaa
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